mirIntegrator
This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see mirIntegrator.
Integrating microRNA expression into signaling pathways for pathway analysis
Bioconductor version: 3.10
Tools for augmenting signaling pathways to perform pathway analysis of microRNA and mRNA expression levels.
Author: Diana Diaz <dmd at wayne dot edu>
Maintainer: Diana Diaz <dmd at wayne.edu>
Citation (from within R, enter
citation("mirIntegrator")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("mirIntegrator")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("mirIntegrator")| mirIntegrator Overview | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | GraphAndNetwork, KEGG, Microarray, Network, Pathways, Software |
| Version | 1.16.0 |
| In Bioconductor since | BioC 3.2 (R-3.2) (8.5 years) |
| License | GPL (>=3) |
| Depends | R (>= 3.3) |
| Imports | graph, ROntoTools, ggplot2, org.Hs.eg.db, AnnotationDbi, Rgraphviz |
| System Requirements | |
| URL | http://datad.github.io/mirIntegrator/ |
See More
| Suggests | RUnit, BiocGenerics |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | mirIntegrator_1.16.0.tar.gz |
| Windows Binary | mirIntegrator_1.16.0.zip |
| Mac OS X 10.11 (El Capitan) | mirIntegrator_1.16.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/mirIntegrator |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/mirIntegrator |
| Bioc Package Browser | https://code.bioconductor.org/browse/mirIntegrator/ |
| Package Short Url | https://bioconductor.org/packages/mirIntegrator/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.10 | Source Archive |