SSPA
This package is for version 3.11 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see SSPA.
General Sample Size and Power Analysis for Microarray and Next-Generation Sequencing Data
Bioconductor version: 3.11
General Sample size and power analysis for microarray and next-generation sequencing data.
Author: Maarten van Iterson
Maintainer: Maarten van Iterson <mviterson at gmail.com>
Citation (from within R, enter
citation("SSPA")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("SSPA")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SSPA")| Power and sample size analysis, Microarray data, RNAseq data | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | GeneExpression, ImmunoOncology, Microarray, RNASeq, Software, StatisticalMethod |
| Version | 2.28.0 |
| In Bioconductor since | BioC 2.4 (R-2.9) (15 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.12), methods |
| Imports | graphics, stats, qvalue, lattice, limma |
| System Requirements | |
| URL | http://www.humgen.nl/MicroarrayAnalysisGroup.html |
See More
| Suggests | BiocStyle, knitr, rmarkdown, genefilter, edgeR, DESeq |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | SSPA_2.28.0.tar.gz |
| Windows Binary | SSPA_2.28.0.zip (32- & 64-bit) |
| macOS 10.13 (High Sierra) | SSPA_2.28.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/SSPA |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SSPA |
| Bioc Package Browser | https://code.bioconductor.org/browse/SSPA/ |
| Package Short Url | https://bioconductor.org/packages/SSPA/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.11 | Source Archive |