ExperimentHub
This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see ExperimentHub.
Client to access ExperimentHub resources
Bioconductor version: 3.6
This package provides a client for the Bioconductor ExperimentHub web resource. ExperimentHub provides a central location where curated data from experiments, publications or training courses can be accessed. Each resource has associated metadata, tags and date of modification. The client creates and manages a local cache of files retrieved enabling quick and reproducible access.
Author: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("ExperimentHub")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ExperimentHub")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual | |
| NEWS | Text |
Details
| biocViews | DataImport, GUI, Infrastructure, Software, ThirdPartyClient |
| Version | 1.4.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (7.5 years) |
| License | Artistic-2.0 |
| Depends | methods, BiocGenerics(>= 0.15.10), AnnotationHub(>= 2.9.11) |
| Imports | utils, S4Vectors, BiocInstaller, curl |
| System Requirements | |
| URL |
See More
| Suggests | knitr, BiocStyle |
| Linking To | |
| Enhances | ExperimentHubData |
| Depends On Me | alpineData, CellMapperData, curatedMetagenomicData, HumanAffyData, restfulSEData, SeqSQC |
| Imports Me | curatedTCGAData, ExperimentHubData, HarmonizedTCGAData, restfulSE |
| Suggests Me | ANF, AnnotationHub, CellMapper, GSE62944 |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ExperimentHub_1.4.0.tar.gz |
| Windows Binary | ExperimentHub_1.4.0.zip |
| Mac OS X 10.11 (El Capitan) | ExperimentHub_1.4.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/ExperimentHub |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ExperimentHub |
| Package Short Url | https://bioconductor.org/packages/ExperimentHub/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.6 | Source Archive |