RImmPort
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see RImmPort.
RImmPort: Enabling Ready-for-analysis Immunology Research Data
Bioconductor version: 3.9
The RImmPort package simplifies access to ImmPort data for analysis in the R environment. It provides a standards-based interface to the ImmPort study data that is in a proprietary format.
Author: Ravi Shankar <rshankar at stanford.edu>
Maintainer: Zicheng Hu <Zicheng.Hu at ucsf.edu>, Ravi Shankar <rshankar at stanford.edu>
citation("RImmPort")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RImmPort")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RImmPort")| RImmPort: Enabling ready-for-analysis immunology research data | R Script | |
| RImmPort: Quick Start Guide | R Script | |
| Reference Manual |
Details
| biocViews | BiomedicalInformatics, DataImport, DataRepresentation, Software |
| Version | 1.12.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (8 years) |
| License | GPL-3 |
| Depends | |
| Imports | plyr, dplyr, DBI, data.table, reshape2, methods, sqldf, tools, utils, RSQLite |
| System Requirements | |
| URL | http://bioconductor.org/packages/RImmPort/ |
See More
| Suggests | knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | RImmPort_1.12.0.tar.gz |
| Windows Binary | RImmPort_1.12.0.zip |
| Mac OS X 10.11 (El Capitan) | RImmPort_1.12.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/RImmPort |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RImmPort |
| Bioc Package Browser | https://code.bioconductor.org/browse/RImmPort/ |
| Package Short Url | https://bioconductor.org/packages/RImmPort/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |