Package: XeniumIO
Type: Package
Title: Import and represent Xenium data from the 10X Xenium Analyzer
Version: 1.2.0
Authors@R: c(
    person("Marcel", "Ramos", , "marcel.ramos@sph.cuny.edu", c("aut", "cre"),
        c(ORCID = "0000-0002-3242-0582")
    ),
    person("Dario", "Righelli", role = "ctb"),
    person("Estella", "Dong", role = "ctb")
    )
Description: The package allows users to readily import spatial data
        obtained from the 10X Xenium Analyzer pipeline. Supported
        formats include 'parquet', 'h5', and 'mtx' files. The package
        mainly represents data as SpatialExperiment objects.
License: Artistic-2.0
Depends: TENxIO, R (>= 4.4.0)
Imports: BiocBaseUtils, BiocGenerics, BiocIO, jsonlite, methods,
        S4Vectors, SingleCellExperiment, SpatialExperiment,
        SummarizedExperiment, VisiumIO
Suggests: arrow, BiocFileCache, BiocStyle, knitr, rmarkdown, tinytest
biocViews: Software, Infrastructure, DataImport, SingleCell, Spatial
VignetteBuilder: knitr
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
BugReports: https://github.com/waldronlab/XeniumIO/issues
URL: https://github.com/waldronlab/XeniumIO
Collate: 'XeniumFile.R' 'TENxXenium-class.R' 'XeniumIO-package.R'
        'utilities.R'
Date: 2025-04-04
Config/pak/sysreqs: make libmagick++-dev gsfonts libicu-dev libssl-dev
        libx11-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:34:29 UTC
RemoteUrl: https://github.com/bioc/XeniumIO
RemoteRef: RELEASE_3_22
RemoteSha: 727bab9ed0925bc41473ce3c2de6b0aba5cb2386
NeedsCompilation: no
Packaged: 2025-11-11 18:21:45 UTC; root
Author: Marcel Ramos [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-3242-0582>),
  Dario Righelli [ctb],
  Estella Dong [ctb]
Maintainer: Marcel Ramos <marcel.ramos@sph.cuny.edu>
Built: R 4.5.2; ; 2025-11-12 03:10:50 UTC; windows
