limmaGUI
GUI for limma Package With Two Color Microarrays
Bioconductor version: Release (3.19)
A Graphical User Interface for differential expression analysis of two-color microarray data using the limma package.
Author: James Wettenhall [aut], Gordon Smyth [aut], Keith Satterley [ctb]
Maintainer: Gordon Smyth <smyth at wehi.edu.au>
Citation (from within R, enter
citation("limmaGUI")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("limmaGUI")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("limmaGUI")
about.html | HTML | |
CustMenu.html | HTML | |
Extracting limma objects from limmaGUI files | ||
import.html | HTML | |
index.html | HTML | |
InputFiles.html | HTML | |
lgDevel.html | HTML | |
limmaGUI Vignette | R Script | |
LinModIntro.pdf | ||
windowsFocus.html | HTML | |
Reference Manual |
Details
biocViews | BatchEffect, Bayesian, DataImport, DifferentialExpression, GUI, GeneExpression, Microarray, MultipleComparison, Normalization, Preprocessing, QualityControl, Regression, Software, TimeCourse, TwoChannel, mRNAMicroarray |
Version | 1.80.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 19.5 years) |
License | GPL (>=2) |
Depends | |
Imports | methods, grDevices, graphics, limma, R2HTML, tcltk, tkrplot, xtable, utils |
System Requirements | |
URL | http://bioinf.wehi.edu.au/limmaGUI/ |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | limmaGUI_1.80.0.tar.gz |
Windows Binary | limmaGUI_1.80.0.zip (64-bit only) |
macOS Binary (x86_64) | limmaGUI_1.80.0.tgz |
macOS Binary (arm64) | limmaGUI_1.80.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/limmaGUI |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/limmaGUI |
Bioc Package Browser | https://code.bioconductor.org/browse/limmaGUI/ |
Package Short Url | https://bioconductor.org/packages/limmaGUI/ |
Package Downloads Report | Download Stats |