MANOR
CGH Micro-Array NORmalization
Bioconductor version: 2.6
Importation, normalization, visualization, and quality control functions to correct identified sources of variability in array-CGH experiments.
Author: Pierre Neuvial <pierre.neuvial at curie.fr>, Philippe Hupe <philippe.hupe at curie.fr>
Maintainer: Pierre Neuvial <pierre.neuvial at curie.fr>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("MANOR")
To cite this package in a publication, start R and enter:
citation("MANOR")
Documentation
| R Script | MANOR overview | |
| Reference Manual |
Details
| biocViews | Microarray, TwoChannel, DataImport, QualityControl, Preprocessing, CopyNumberVariants |
| Depends | R (>= 1.8.0), GLAD |
| Imports | GLAD, graphics, grDevices, stats, utils |
| Suggests | |
| System Requirements | |
| License | GPL |
| URL | http://bioinfo.curie.fr/projects/manor/index.html |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.20.0 |
| Since | Bioconductor 1.7 (R-2.2) |
Package Downloads
| Package Source | MANOR_1.20.0.tar.gz |
| Windows Binary | MANOR_1.20.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | MANOR_1.20.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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