Bioconductor version: 2.6
Spot segmentation via model-based clustering and gridding for blocks within microarray slides, as described in Li et al, Robust Model-Based Segmentation of Microarray Images, Technical Report no. 473, Department of Statistics, University of Washington.
Author: Qunhua Li, Chris Fraley, Adrian Raftery Department of Statistics, University of Washington
Maintainer: Chris Fraley <fraley at stat.washington.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("spotSegmentation")
To cite this package in a publication, start R and enter:
citation("spotSegmentation")
spotsegdoc.pdf | ||
Reference Manual |
biocViews | Microarray, TwoChannel, QualityControl, Preprocessing |
Depends | R (>= 1.7.0), mclust |
Imports | |
Suggests | |
System Requirements | |
License | GPL (>= 2) |
URL | http://www.stat.washington.edu/fraley |
Depends On Me | |
Imports Me | |
Suggests Me | |
Version | 1.22.0 |
Since | Bioconductor 1.6 (R-2.1) or earlier |
Package Source | spotSegmentation_1.22.0.tar.gz |
Windows Binary | spotSegmentation_1.22.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | spotSegmentation_1.22.0.tgz |
Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!