\name{getNextGOIDs} \alias{getNextGOIDs} %- Also NEED an '\alias' for EACH other topic documented here. \title{ retrieve parents or children GO IDs for given GO IDs } \description{ A function to retrieve parents or children GO IDs for given IDs with specified filtered IDs. } \usage{ getNextGOIDs(GOIDs, GOType=c('GO', 'GO.BP', 'GO.CC', 'GO.MF'), remove=TRUE, filterGOIDs=NULL, UP=TRUE) } %- maybe also 'usage' for other objects documented here. \arguments{ \item{GOIDs}{ a character GO ID vector } \item{GOType}{ type of GO IDs, 'GO', 'GO.BP', 'GO.CC' and 'GO.MF' } \item{remove}{ logic, remove the empty GOIDs in the return values} \item{filterGOIDs}{ a chacater vector for filtered GO IDs} \item{UP}{ logic, determine search Parents or Children.} } \details{ filterGraphIDs is used to only keep nodes in filterGraphIDs. } \value{ return a GO IDs list representing a network. } \references{ Feng, G., Du, P., Krett, N., Tessel, M., Rosen, S., Kibbe, W.A. and Lin, S.M., 'A collection of bioconductor methods to visualize gene-list annotations', BMC Research Notes 2010, 3:10} \author{ Gang Feng, Pan Du and Simon Lin } \examples{ getNextGOIDs(c('GO:0050794','GO:0034960')) } % Add one or more standard keywords, see file 'KEYWORDS' in the % R documentation directory. \keyword{ methods }