\name{getcaBIOPATHList} \alias{getcaBIOPATHList} %- Also NEED an '\alias' for EACH other topic documented here. \title{ Retrieve caBIO path categories containing given genes } \description{ Function to retrieve caBIO pathway IDss containing the given genes. } \usage{ getcaBIOPATHList(lls) } %- maybe also 'usage' for other objects documented here. \arguments{ \item{lls}{ an Entrez gene IDs vector } } \details{ The given gene IDs should be Entrez gene IDs. And the return list also only contains Entrez gene IDs besides caBIO pathway IDs. } \value{ return an Entrez genes ID list, names of the list are caBIO pahtway IDs and elements are Entrez gene IDs. } \references{ Feng, G., Du, P., Krett, N., Tessel, M., Rosen, S., Kibbe, W.A. and Lin, S.M., 'A collection of bioconductor methods to visualize gene-list annotations', BMC Research Notes 2010, 3:10} \author{ Gang Feng, Pan Du and Simon Lin } \seealso{ \code{\link{getCategoryList}}} \examples{ \dontrun{a <- getcaBIOPATHList('1647')} \dontrun{length(a)} } % Add one or more standard keywords, see file 'KEYWORDS' in the % R documentation directory. \keyword{ methods }