\name{getcaBIOPATHTerms} \alias{getcaBIOPATHTerms} %- Also NEED an '\alias' for EACH other topic documented here. \title{ Get Pathway names of given REACTOME PATH_DB IDs } \description{ Function to map given caBIO pathway IDs to Pathway names. } \usage{ getcaBIOPATHTerms(caBIOPATHIDs) } %- maybe also 'usage' for other objects documented here. \arguments{ \item{caBIOPATHIDs}{ a caBIO pathway IDs vector } } \details{ caBIO(Cancer Bioinformatics Infrastructure Objects, https://cabig.nci.nih.gov/tools/cabio) integrates three pathway databases from NCI-Nature curated, Biocarta and Reactome. Therefore, terms could be same from different databases and the source library is added the end of each term. } \value{ return the caBIO pathway terms of given caBIO pathway IDs. } \references{ Feng, G., Du, P., Krett, N., Tessel, M., Rosen, S., Kibbe, W.A. and Lin, S.M., 'A collection of bioconductor methods to visualize gene-list annotations', BMC Research Notes 2010, 3:10} \author{ Gang Feng, Pan Du and Simon Lin } \examples{ \dontrun{getcaBIOPATHTerms(c('7622', '289', '7173'))} } % Add one or more standard keywords, see file 'KEYWORDS' in the % R documentation directory. \keyword{ methods }