\name{plotSimMatrix} \alias{plotSimMatrix} \title{Generate the SQUAD Simulation matrix display.} \description{ This method is used to create a simulation matrix. Each columns correspond to the user-selected component node and the each rows, to the conditions. } \usage{ plotSimMatrix(object) } %- maybe also 'usage' for other objects documented here. \arguments{ \item{object}{ object of the Class \code{SquadSimResServiceImpl}. } } \author{ Martial Sankar } \seealso{ More specific information in \code{\link{plotSimMatrix-methods}}. For more informations about the input object see \code{\link{SquadSimResServiceImpl-class}}. } \examples{ fpath <- system.file("extdata", package="SQUADD") fileModel <- file.path(fpath,"data_IAA") nm <- c("ARF(a)", "ARF(i)", "AR_Genes", "Aux/IAA", "BES1/BZR1", "BIN2", "BR", "BRI1-BAK1","BRR_Genes","BRX","BR_Biosynthesis","BZR1", "DO", "IAA", "IAA_Biosynthesis", "NGA1", "PIN", "SCFTir1","StimAux", "StimBR") t <- 50 ## call constructor obj <- simResService( folder=fileModel, time=t, ncolor=5, legend=nm, indexDeno=1, method="lowess", selectNode=c("DO","IAA_Biosynthesis","BR_Biosynthesis", "IAA", "BR")) ## call method plotSimMatrix(obj) } \keyword{simulation}