\name{cmat} \alias{cmat} \docType{data} \title{ Contrast matrix describing the experimental questions} \description{ This matrix of numerical constants describes the experimental question, \eqn{p} say. Each experimental question is described by a single contrast vector (a single row in cmat) or by a contrast matrix (several rows in cmat). The ordering of the columns corresponds to that of the associated design matrix X. Thus, typically the first two elements in a row of cmat are reserved for for the two dyes. E.g. to compare the two dyes, we set (-1, 1, 0, ..., 0). } \usage{data(cmat)} \format{ } \details{ } \source{ } \references{ Bretz, F and Landgrebe J and Brunner E (2003):"Design and analysis of two colour factorial microarray experiments", submitted. } \examples{ data(cmat) ## maybe str(cmat) ; plot(cmat) ... } \keyword{datasets}