| Package | Maintainer | Title |
|---|---|---|
| Clonality | Irina Ostrovnaya | Clonality testing |
| gaia | S. Morganella | GAIA: An R package for genomic analysis of significant chromosomal aberrations. |
| KCsmart | Jorma de Ronde | Multi sample aCGH analysis package using kernel convolution |
| mBPCR | P.M.V. Rancoita | Bayesian Piecewise Constant Regression for DNA copy number estimation |
| pint | Olli-Pekka Huovilainen | Pairwise INTegration of functional genomics data |
| Vega | Sandro Morganella | An R package for copy number data segmentation |