To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("logitT")
In most cases, you don't need to download the package archive at all.
logitT
|
This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see logitT.
logit-t Package
Bioconductor version: 2.8
The logitT library implements the Logit-t algorithm introduced in --A high performance test of differential gene expression for oligonucleotide arrays-- by William J Lemon, Sandya Liyanarachchi and Ming You for use with Affymetrix data stored in an AffyBatch object in R.
Author: Tobias Guennel <tguennel at vcu.edu>
Maintainer: Tobias Guennel <tguennel at vcu.edu>
Citation (from within R,
enter citation("logitT")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("logitT")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("logitT")
| logitT.pdf | ||
| Reference Manual |
Details
| biocViews | DifferentialExpression, Microarray, Software |
| Version | 1.10.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (7.5 years) |
| License | GPL (>= 2) |
| Depends | affy |
| Imports | |
| LinkingTo | |
| Suggests | SpikeInSubset |
| SystemRequirements | |
| Enhances | |
| URL | http://www.bioconductor.org |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | logitT_1.10.0.tar.gz |
| Windows Binary | logitT_1.10.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/logitT/tree/release-2.8 |
| Package Short Url | http://bioconductor.org/packages/logitT/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
