GeneAnswers
This package is for version 3.11 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see GeneAnswers.
Integrated Interpretation of Genes
Bioconductor version: 3.11
GeneAnswers provides an integrated tool for biological or medical interpretation of the given one or more groups of genes by means of statistical test.
Author: Lei Huang, Gang Feng, Pan Du, Tian Xia, Xishu Wang, Jing, Wen, Warren Kibbe and Simon Lin
Maintainer: Lei Huang <lhuang7 at uchicago.edu> and Gang Feng <gilbertfeng at gmail.com>
citation("GeneAnswers")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GeneAnswers")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GeneAnswers")| GeneAnswers | R Script | |
| GeneAnswers web-based visualization module | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DataRepresentation, GraphsAndNetworks, Infrastructure, Software, Visualization |
| Version | 2.30.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) (14.5 years) |
| License | LGPL (>= 2) |
| Depends | R (>= 3.0.0), igraph, RCurl, annotate, Biobase(>= 1.12.0), methods, XML, RSQLite, MASS, Heatplus, RColorBrewer |
| Imports | RBGL, annotate, downloader |
| System Requirements | |
| URL |
See More
| Suggests | GO.db, KEGG.db, reactome.db, biomaRt, AnnotationDbi, org.Hs.eg.db, org.Rn.eg.db, org.Mm.eg.db, org.Dm.eg.db, graph |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | InterMineR |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | GeneAnswers_2.30.0.tar.gz |
| Windows Binary | GeneAnswers_2.30.0.zip |
| macOS 10.13 (High Sierra) | GeneAnswers_2.30.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/GeneAnswers |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/GeneAnswers |
| Bioc Package Browser | https://code.bioconductor.org/browse/GeneAnswers/ |
| Package Short Url | https://bioconductor.org/packages/GeneAnswers/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.11 | Source Archive |