miRmine
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment
Bioconductor version: Release (3.19)
miRmine database is a collection of expression profiles from different publicly available miRNA-seq datasets, Panwar et al (2017) miRmine: A Database of Human miRNA Expression, prepared with this data package as RangedSummarizedExperiment.
Author: Dusan Randjelovic [aut, cre]
Maintainer: Dusan Randjelovic <dusan.randjelovic at sbgenomics.com>
citation("miRmine")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("miRmine")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | ExpressionData, Homo_sapiens_Data, RNASeqData, SequencingData, Software |
Version | 1.26.0 |
In Bioconductor since | BioC 3.6 (R-3.4) (7 years) |
License | GPL (>= 3) |
Depends | R (>= 3.5.0), SummarizedExperiment |
Imports | |
System Requirements | |
URL |
See More
Suggests | BiocStyle, knitr, rmarkdown, DESeq2 |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
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Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | miRmine_1.26.0.zip (64-bit only) |
macOS Binary (x86_64) | miRmine_1.26.0.tgz |
macOS Binary (arm64) | miRmine_1.26.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/miRmine |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/miRmine |
Package Short Url | https://bioconductor.org/packages/miRmine/ |
Package Downloads Report | Download Stats |