8e69943b0f0cb693faee81f41bfe93be *CITATION
d42a881eed88ac5b1dff40ab603b97b2 *DESCRIPTION
a5dd418c2596c40086a97b7082e1eb37 *INDEX
895be2463cb8808d6ef2ede092b61473 *Meta/Rd.rds
86d0636b4c700e416386835098fcba6f *Meta/features.rds
69f9850eba7e16d43aaf9490779907f4 *Meta/hsearch.rds
f767953ea4ddb8efb9aa6cc1378341ca *Meta/links.rds
c678ab40d86d196559de2a7cac494374 *Meta/nsInfo.rds
4c5e4ef5bbd01e4057d69a6fb7ca41da *Meta/package.rds
bd1819e62e0efa49662b6d5575aaf161 *Meta/vignette.rds
d735880d594a0d9112c46a00564e09ea *NAMESPACE
84cf91c0a9b6fb743f5c87d1e289eabf *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/crupR
3dc621d8d772a43991f4afd96e12d419 *R/crupR.rdb
0d7a6387f7762577f96a00bf1947203e *R/crupR.rdx
196f552fe25e61ba14e41e3d5db6a0a3 *doc/crupR-vignette.R
d5f8c99af91b5f504d62ecd127a17e8d *doc/crupR-vignette.Rmd
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8100b1766fc28cdcd6d08c12f7f9d50b *doc/index.html
4afe4db346da4d6a0a05507c7a21695e *extdata/Condition1.H3K27ac.bam
3347dd15a5f5ed1d1da944e173df2dd1 *extdata/Condition1.H3K27ac.bam.bai
50031bfb5a0979e845d604d8241a02df *extdata/Condition1.H3K4me1.bam
480d11907c816107a2d3628f6a474098 *extdata/Condition1.H3K4me1.bam.bai
bf4d81d05efcf85da3934a48209820d5 *extdata/Condition1.H3K4me3.bam
1717806442890d08b149d3c95f98e479 *extdata/Condition1.H3K4me3.bam.bai
18464320442f89e62f42c48e852d15d7 *extdata/Condition1.Input.bam
86df6ff6a3343f44064b0969e4776076 *extdata/Condition1.Input.bam.bai
238a3fca3c3d2f9e47a4ef59b2bce5a4 *extdata/Condition2.H3K27ac.bam
1092e85e9b7c04163d49bc6feaca5d80 *extdata/Condition2.H3K27ac.bam.bai
f52a72a8a5a65e47868f73835e12e451 *extdata/Condition2.H3K4me1.bam
01be1ebf1daf0763722d326ae8c5eb64 *extdata/Condition2.H3K4me1.bam.bai
f8f3154a3bc193f50cc2a6d514f76107 *extdata/Condition2.H3K4me3.bam
9501dd791d4d94fe5c29514ab76848c5 *extdata/Condition2.H3K4me3.bam.bai
b38d0cf94658efa4f997682e60477488 *extdata/Condition2.Input.bam
b1d0c8727e9b14c3956fed4dfbd67f36 *extdata/Condition2.Input.bam.bai
936831f5e973432988935efaaec4a95a *extdata/RegulatoryUnits.rds
c39cacebdb68e60eb2ab3b46d8910099 *extdata/RegulatoryUnitsNearestGene.rds
1eff60c7680406abaafecfc01f5d57bd *extdata/active_vs_inactive.rds
9e91c853b85a39d8ff509db50604b432 *extdata/condition1_predictions.rds
49a2cd549b8559cabb990c167b4b52db *extdata/condition2_clusters.rds
ba7afe315dcc79c48c5cb1b9a46aba32 *extdata/condition2_inputfree_normalized.rds
d133ae0512a6188a8c43928010297940 *extdata/condition2_normalized.rds
957ea7e9525ec21852c1ad5fb093e4b6 *extdata/condition2_peaks.rds
d75b10f976e3dc32e928f43cf03e7127 *extdata/condition2_predictions.rds
dc1b6161a1400c7a3e33709d0f29215f *extdata/differential_enhancers.rds
5a0a6f25d1512fd8949738aed033a5eb *extdata/ecdf.rds
19cc78c795772ad9014e7f7629c61316 *extdata/enhancer_vs_active_promoter.rds
24fa0625f446b6bbb9c14118b5649d52 *extdata/expressions.rds
a386e78b186dce6b535a1bf698a76641 *extdata/mESC_mapq30_KR_all_TADs.bed
dad76821cf277ead759e5bbe513bcfb4 *help/AnIndex
55057680f951d806cd397262d1e6a0a2 *help/aliases.rds
89bb0f35f8319682a0afc953ac8a6ce3 *help/crupR.rdb
86cc4232c168f52772207dc9ddbe58c7 *help/crupR.rdx
53682b143b2437c17e85c48a4467780e *help/paths.rds
4e955e0dec9ecafe99c6083e913231a8 *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
061d18c63c4233ecc9e1a7aa946cac87 *script/bam_files.txt
de1683cd2445ff8d77f233aa7dacd808 *script/crupR_example_files.txt
76c5fe64c6c7866dabd8637cffe446a2 *script/crupR_files.txt
