Entry: ALL
Aliases: ALL
Keywords: datasets
Description: Acute Lymphoblastic Leukemia Data from the Ritz Laboratory
URL: ../../../library/GOstats/html/ALL.html

Entry: GOHyperG
Aliases: GOHyperG
Keywords: htest
Description: Hypergeometric Tests for GO
URL: ../../../library/GOstats/html/GOHyperG.html

Entry: GOLeaves
Aliases: GOLeaves
Keywords: manip
Description: Identify the leaves in a GO Graph
URL: ../../../library/GOstats/html/GOLeaves.html

Entry: GOstats-defunct
Aliases: GOstats-defunct combGOGraph
Keywords: manip
Description: Defunct Functions in GOstats Package
URL: ../../../library/GOstats/html/GOstats-defunct.html

Entry: Ndists
Aliases: Ndists Bdists
Keywords: datasets
Description: Distance matrices for the BCR/ABL and NEG subgroups.
URL: ../../../library/GOstats/html/Ndists.html

Entry: compCorrGraph
Aliases: compCorrGraph
Keywords: manip
Description: A function to compute a correlation based graph from Gene Expression Data
URL: ../../../library/GOstats/html/compCorrGraph.html

Entry: compGdist
Aliases: compGdist
Keywords: manip
Description: A function to compute the distance between pairs of nodes in a graph.
URL: ../../../library/GOstats/html/compGdist.html

Entry: dropECode
Aliases: dropECode
Keywords: manip
Description: Drop GO labels for specified Evidence Codes
URL: ../../../library/GOstats/html/dropECode.html

Entry: getEvidence
Aliases: getEvidence
Keywords: manip
Description: Get the Evidence codes for a set of GO terms.
URL: ../../../library/GOstats/html/getEvidence.html

Entry: getGOTerm
Aliases: getGOTerm getGOParents getGOChildren getGOOntology
Keywords: manip
Description: Functions to Access GO data.
URL: ../../../library/GOstats/html/getGOTerm.html

Entry: getOntology
Aliases: getOntology
Keywords: manip
Description: Get GO terms for a specified ontology
URL: ../../../library/GOstats/html/getOntology.html

Entry: hasGOannote
Aliases: hasGOannote
Keywords: manip
Description: Check for GO annotation
URL: ../../../library/GOstats/html/hasGOannote.html

Entry: idx2dimnames
Aliases: idx2dimnames
Keywords: manip
Description: Index to Dimnames
URL: ../../../library/GOstats/html/idx2dimnames.html

Entry: makeGOGraph
Aliases: makeGOGraph
Keywords: manip
Description: Construct a GO Graph
URL: ../../../library/GOstats/html/makeGOGraph.html

Entry: notConn
Aliases: notConn
Keywords: manip
Description: Find genes that are not connected to the others.
URL: ../../../library/GOstats/html/notConn.html

Entry: oneGOGraph
Aliases: oneGOGraph GOGraph
Keywords: manip
Description: Construct the GO graph given a set of leaves.
URL: ../../../library/GOstats/html/oneGOGraph.html

Entry: shortestPath
Aliases: shortestPath
Keywords: manip
Description: Shortest Path Analysis
URL: ../../../library/GOstats/html/shortestPath.html

Entry: simLL
Aliases: simLL simUI simLP
Keywords: manip
Description: Functions to compute similarities between GO graphs and also between LocusLink IDs based on their induced GO graphs.
URL: ../../../library/GOstats/html/simLL.html

Entry: triadCensus
Aliases: triadCensus triad enumPairs isTriad reduce2Degreek
Keywords: manip
Description: Triad Functions
URL: ../../../library/GOstats/html/triadCensus.html
