| bwmc | Basic utilities for the EBcoexpress package | 
| crit.fun | Basic utilities for the EBcoexpress package | 
| ebCoexpressFullTCAECM | Functions to run single-study analyses | 
| ebCoexpressMeta | A function for DC meta-analysis that combines individual study analyses | 
| ebCoexpressOneStep | Functions to run single-study analyses | 
| ebCoexpressZeroStep | Functions to run single-study analyses | 
| fiftyGenes | The fiftyGenes expression matrix | 
| initializeHP | Initializing Hyperparameters for EM | 
| makeMyD | A function to convert the X expression matrix into the D correlation matrix | 
| priorDiagnostic | Visual diagnostic for the EBcoexpress prior | 
| rankMyGenes | A function to rank the genes by the number of DC pairs in which they appear | 
| showNetwork | A function for looking at the co-expression among a small group of genes | 
| showPair | A function for looking at a pair's differential co-expression |