AintoB                  Insert a matrix into another
BioCor-package          BioCor: A package to calculate functional
                        similarities
addSimilarities         Additive integration of similarities
clusterGeneSim          Similarity score between clusters of genes
                        based on genes similarity
clusterSim              Similarity score between clusters of genes
                        based on pathways similarity
combinadic              i-th combination of n elements taken from r
combineScores           Combining values
combineSources          Combine different sources of pathways
conversions             Convert the similarities formats
diceSim                 Compare pathways
duplicateIndices        Finds the indices of the duplicated events of a
                        vector
geneSim                 Similarity score genes based on pathways
                        similarity
inverseList             Invert a list
mclusterGeneSim         Similarity score between clusters of genes
                        based on genes similarity
mclusterSim             Similarity score between clusters of genes
                        based on pathways similarity
mgeneSim                Similarity score genes based on pathways
                        similarity
mpathSim                Calculates the Dice similarity between pathways
pathSim                 Calculates the Dice similarity between pathways
plot_data               The position of the nodes is based on the
                        similarity between them.
removeDup               Remove duplicated rows and columns
seq2mat                 Transforms a vector to a symmetric matrix
similarities            Apply a function to a list of similarities
weighted                Weighted operations
