findPairedBases	findPairedBases
flattenDotBracket	flattenDotBracket
generatePairsProbabilityMatrix	generatePairsProbabilityMatrix
pairsToSecondaryStructure	pairsToSecondaryStructure
plotCompositePairsMatrix	plotCompositePairsMatrix
plotPairsProbabilityMatrix	plotPairsProbabilityMatrix
predictAlternativeSecondaryStructures	predictAlternativeSecondaryStructures
predictSecondaryStructure	predictSecondaryStructure
readCT	readCT
readDotBracket	readDotBracket
rnaCentralGenomicCoordinatesSearch	rnaCentralGenomicCoordinatesSearch
rnaCentralRetrieveEntry	rnaCentralRetrieveEntry
rnaCentralTextSearch	rnaCentralTextSearch
writeCT	writeCT
writeDotBracket	writeDotBracket
