Fcs filename and gate name stored in 'custom_info' element are beyong the scope of the gatingML standard and thus not covered by the default 'read.gatingML'.
parse.gateInfo(file, ...)
file | xml file path |
---|---|
... | additional arguments passed to the handlers of 'xmlTreeParse' |
a data.frame that contains three columns: id (gateId), name (gate name), fcs (fcs_file_filename).