Hierarchical Modelling of Species Communities (HMSC) is
a model-based approach for analyzing community ecological data.
This package implements it in the Bayesian framework with Gibbs
Markov chain Monte Carlo (MCMC) sampling (Tikhonov et al. (2020)
<doi:10.1111/2041-210X.13345>).
| Version: |
3.3-7 |
| Depends: |
R (≥ 3.0.2), coda |
| Imports: |
abind, ape, BayesLogit, fields, FNN, ggplot2, MASS, Matrix, matrixStats, MCMCpack, methods, nnet, rlang, parallel, pracma, pROC, sp, statmod, truncnorm |
| Suggests: |
R.rsp, testthat, corrplot |
| Published: |
2025-08-28 |
| DOI: |
10.32614/CRAN.package.Hmsc |
| Author: |
Gleb Tikhonov [aut],
Otso Ovaskainen 
[aut, cre],
Jari Oksanen [aut],
Melinda de Jonge [aut],
Oystein Opedal [aut],
Tad Dallas [aut] |
| Maintainer: |
Otso Ovaskainen <otso.t.ovaskainen at jyu.fi> |
| BugReports: |
https://github.com/hmsc-r/HMSC/issues/ |
| License: |
GPL-3 | file LICENSE |
| URL: |
https://www.helsinki.fi/en/researchgroups/statistical-ecology/software/hmsc |
| NeedsCompilation: |
no |
| Materials: |
README, NEWS |
| In views: |
Environmetrics |
| CRAN checks: |
Hmsc results |