LDcorSV: Linkage Disequilibrium Corrected by the Structure and the Relatedness

Four measures of linkage disequilibrium are provided: the usual r^2 measure, the r^2_S measure (r^2 corrected by the structure sample), the r^2_V (r^2 corrected by the relatedness of genotyped individuals), the r^2_VS measure (r^2 corrected by both the relatedness of genotyped individuals and the structure of the sample).

Version: 1.3.4
Imports: parallel
Suggests: testthat
Published: 2025-07-29
Author: David Desrousseaux [aut], Florian Sandron [aut], Aurélie Siberchicot ORCID iD [aut, cre], Christine Cierco-Ayrolles [aut], Brigitte Mangin [aut]
Maintainer: Aurélie Siberchicot <aurelie.siberchicot at univ-lyon1.fr>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://gitlab.in2p3.fr/aursiber/ldcorsv
NeedsCompilation: no
Materials: README
CRAN checks: LDcorSV results

Documentation:

Reference manual: LDcorSV.html , LDcorSV.pdf

Downloads:

Package source: LDcorSV_1.3.4.tar.gz
Windows binaries: r-devel: LDcorSV_1.3.4.zip, r-release: LDcorSV_1.3.4.zip, r-oldrel: LDcorSV_1.3.4.zip
macOS binaries: r-release (arm64): LDcorSV_1.3.4.tgz, r-oldrel (arm64): LDcorSV_1.3.4.tgz, r-release (x86_64): LDcorSV_1.3.4.tgz, r-oldrel (x86_64): LDcorSV_1.3.4.tgz
Old sources: LDcorSV archive

Linking:

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