BEAM_res                This is a test data for this package test data
                        describtion
clusterData             Cluster Data Based on Different Methods
enrichCluster           Perform GO/KEGG Enrichment Analysis for
                        Multiple Clusters
exprs                   Generic to access cds count matrix
exprs,cell_data_set-method
                        Method to access cds count matrix
exps                    This is a test data for this package test data
                        describtion
filter.std modified by Mfuzz filter.std
                        using filter.std to filter low expression genes
getClusters             Determine Optimal Clusters for Gene Expression
                        or Pseudotime Data
net                     This is a test data for this package test data
                        describtion
normalized_counts       Return a size-factor normalized and
                        (optionally) log-transformed expression
plot_genes_branched_heatmap2
                        Create a heatmap to demonstrate the bifurcation
                        of gene expression along two branchs which is
                        slightly modified in monocle2
plot_multiple_branches_heatmap2
                        Create a heatmap to demonstrate the bifurcation
                        of gene expression along multiple branches
plot_pseudotime_heatmap2
                        Plots a pseudotime-ordered, row-centered
                        heatmap which is slightly modified in monocle2
pre_pseudotime_matrix   Calculate and return a smoothed pseudotime
                        matrix for the given gene list
prepareDataFromscRNA    Prepare scRNA Data for clusterGvis Analysis
pseudotime              Generic to extract pseudotime from CDS object
pseudotime,cell_data_set-method
                        Method to extract pseudotime from CDS object
sig_gene_names          This is a test data for this package test data
                        describtion
size_factors            Get the size factors from a cds object.
termanno                This is a test data for this package test data
                        describtion
termanno2               This is a test data for this package test data
                        describtion
traverseTree            traverseTree function
visCluster              using visCluster to visualize cluster results
                        from clusterData and enrichCluster output
