* using log directory 'd:/Rcompile/CRANpkg/local/4.6/DSMolgenisArmadillo.Rcheck' * using R Under development (unstable) (2025-07-26 r88458 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'DSMolgenisArmadillo/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'DSMolgenisArmadillo' version '3.0.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... INFO Package suggested but not available for checking: 'dsBaseClient' * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'DSMolgenisArmadillo' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [5s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [2s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [5s] ERROR Running 'testthat.R' [4s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(DSMolgenisArmadillo) Loading required package: DSI Loading required package: progress Loading required package: R6 Loading required package: MolgenisAuth > library(tibble) > > test_check("DSMolgenisArmadillo") An object of class "ArmadilloCredentials" Slot "access_token": [1] "access456" Slot "expires_in": [1] 300 Slot "expires_at": [1] "2025-07-27 07:32:16 CEST" Slot "id_token": [1] "id123" Slot "refresh_token": [1] "refresh123" Slot "token_type": [1] "Bearer" Slot "auth_type": [1] "keycloak" [ FAIL 1 | WARN 2 | SKIP 1 | PASS 397 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • I still don't get the .deparse arguments (1): 'test-utils.R:91:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-ArmadilloOAuth.R:86:3'): .refresh_token returns success message if new credentials are not null and option fusionauth ── DSMolgenisArmadillo:::.refresh_token(server, credentials_in) not equal to `credentials_out`. Attributes: < Component "expires_in": Mean relative difference: 0.210324 > [ FAIL 1 | WARN 2 | SKIP 1 | PASS 397 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [5s] OK * checking PDF version of manual ... [21s] OK * checking HTML version of manual ... [5s] OK * DONE Status: 1 ERROR