* using log directory 'd:/Rcompile/CRANpkg/local/4.5/fdasrvf.Rcheck'
* using R Under development (unstable) (2024-04-30 r86503 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'fdasrvf/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'fdasrvf' version '2.2.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'fdasrvf' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 13.2.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s] OK
* checking whether the package can be unloaded cleanly ... [1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s] OK
* checking loading without being on the library search path ... [1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [22s] OK
* checking Rd files ... [2s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [1s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compiled code ... OK
* checking examples ... [15s] ERROR
Running examples in 'fdasrvf-Ex.R' failed
The error most likely occurred in:

> ### Name: pair_align_functions_bayes
> ### Title: Align two functions
> ### Aliases: pair_align_functions_bayes
> ### Keywords: bayesian
> 
> ### ** Examples
> 
> out <- pair_align_functions_bayes(
+   f1 = simu_data$f[, 1],
+   f2 = simu_data$f[, 2],
+   timet = simu_data$time
+ )
Resampling as number of points on q function = 101 is not a multiple of times = 5.
Error in .Call("dpcode", PACKAGE = "fdasrvf", q1, q1L, q2L, times, cut) : 
  "dpcode" not available for .Call() for package "fdasrvf"
Calls: pair_align_functions_bayes -> dpcode
Execution halted
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [16s] ERROR
  Running 'testthat.R' [15s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > if (requireNamespace("testthat", quietly = TRUE)){
  +   library(fdasrvf)
  + 
  +   testthat::test_check("fdasrvf")
  +   testthat::snapshot_accept(files = NULL, path = "testthat")
  + } else{
  +   stop("Need testthat to run checks")
  + }
  i Initializing...
  i Aligning 21 functions in SRVF space to 3 fPCA components...
  i Starting iteration 1...
  i Starting iteration 2...
  i Starting iteration 3...
  i Starting iteration 4...
  i Starting iteration 5...
   [1] 0.15604919 0.06564122 0.03321528 0.03182538 0.00000000 0.00000000
   [7] 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000
  [13] 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000
  [19] 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000
  [25] 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000
  [31] 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000
  [37] 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000
  [43] 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000
  [49] 0.00000000 0.00000000 0.00000000
  i Using lambda = 0
  i Initializing...
  i Computing Karcher mean of 21 functions in SRSF space...
  i Entering iteration 1...
  ! The argument `x` is of class <fdawarp> but has not been
  computed using the median as centroid type.
  i Rerunning `time_warping()` with `centroid_type = "median"`...
  i Using lambda = 0
  i Initializing...
  i Computing Karcher median of 21 functions in SRSF space...
  i Entering iteration 1...
  ! The argument `x` is of class <fdawarp> but has not been
  computed using the median as centroid type.
  i Rerunning `time_warping()` with `centroid_type = "median"`...
  i Using lambda = 0
  i Initializing...
  i Computing Karcher median of 21 functions in SRSF space...
  i Entering iteration 1...
  i Using lambda = 0
  i Initializing...
  i Computing Karcher mean of 21 functions in SRSF space...
  i Entering iteration 1...
  ! The maximal number of iterations has been reached.
  [ FAIL 7 | WARN 0 | SKIP 4 | PASS 79 ]
  
  ══ Skipped tests (4) ═══════════════════════════════════════════════════════════
  • On CRAN (4): 'test-align-fpca.R:21:3', 'test-boxplot.R:36:3',
    'test-kmeans.R:25:3', 'test-time-warping.R:30:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test_pair_align_functions_bayes.R:6:3'): Verify pair_align_functions_bayes() works as intended ──
  Error in `.Call("dpcode", PACKAGE = "fdasrvf", q1, q1L, q2L, times, cut)`: "dpcode" not available for .Call() for package "fdasrvf"
  Backtrace:
      ▆
   1. └─fdasrvf::pair_align_functions_bayes(...) at test_pair_align_functions_bayes.R:6:3
   2.   └─fdasrvf:::dpcode(qt1_5[row], qt1_5, qt2_5, times, cut)
  ── Error ('test_pair_align_functions_expomap.R:10:3'): Verify pair_align_functions_expomap() works as intended ──
  Error in `.Call("order_l2norm", PACKAGE = "fdasrvf", x, y)`: "order_l2norm" not available for .Call() for package "fdasrvf"
  Backtrace:
      ▆
   1. └─fdasrvf::pair_align_functions_expomap(...) at test_pair_align_functions_expomap.R:10:3
   2.   └─fdasrvf:::f.exp1(...)
   3.     ├─fdasrvf:::calcY(f.L2norm(g), g$y)
   4.     └─fdasrvf:::f.L2norm(g)
   5.       └─fdasrvf:::order_l2norm(f$x, f$y)
  ── Error ('test_pair_align_functions_expomap.R:59:3'): Verify init.coef arguments work correctly ──
  Error in `.Call("order_l2norm", PACKAGE = "fdasrvf", x, y)`: "order_l2norm" not available for .Call() for package "fdasrvf"
  Backtrace:
      ▆
   1. └─fdasrvf::pair_align_functions_expomap(...) at test_pair_align_functions_expomap.R:59:3
   2.   └─fdasrvf:::f.exp1(...)
   3.     ├─fdasrvf:::calcY(f.L2norm(g), g$y)
   4.     └─fdasrvf:::f.L2norm(g)
   5.       └─fdasrvf:::order_l2norm(f$x, f$y)
  ── Error ('test_pair_align_functions_expomap.R:91:3'): Check calcY() works as intended ──
  Error in `.Call("calcY", PACKAGE = "fdasrvf", area, gy)`: "calcY" not available for .Call() for package "fdasrvf"
  Backtrace:
      ▆
   1. ├─testthat::expect_equal(sum(fdasrvf:::calcY(2, 0:2)), 0.1155056305) at test_pair_align_functions_expomap.R:91:3
   2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─fdasrvf:::calcY(2, 0:2)
  ── Error ('test_pair_align_functions_expomap.R:96:3'): Check cuL2norm2() works as intended ──
  Error in `.Call("cuL2norm2", PACKAGE = "fdasrvf", x, y)`: "cuL2norm2" not available for .Call() for package "fdasrvf"
  Backtrace:
      ▆
   1. ├─testthat::expect_equal(prod(fdasrvf:::cuL2norm2(0:2, 1:3)), 22.5) at test_pair_align_functions_expomap.R:96:3
   2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─fdasrvf:::cuL2norm2(0:2, 1:3)
  ── Error ('test_pair_align_functions_expomap.R:102:3'): Check trapzCpp() works as intended ──
  Error in `.Call("trapzCpp", PACKAGE = "fdasrvf", x, y)`: "trapzCpp" not available for .Call() for package "fdasrvf"
  Backtrace:
      ▆
   1. ├─testthat::expect_equal(fdasrvf:::trapzCpp(0:2, 1:3), 4) at test_pair_align_functions_expomap.R:102:3
   2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─fdasrvf:::trapzCpp(0:2, 1:3)
  ── Error ('test_pair_align_functions_expomap.R:108:3'): Check order_l2norm() works as intended ──
  Error in `.Call("order_l2norm", PACKAGE = "fdasrvf", x, y)`: "order_l2norm" not available for .Call() for package "fdasrvf"
  Backtrace:
      ▆
   1. ├─testthat::expect_equal(fdasrvf:::order_l2norm(0:2, 1:3), 3) at test_pair_align_functions_expomap.R:108:3
   2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─fdasrvf:::order_l2norm(0:2, 1:3)
  
  [ FAIL 7 | WARN 0 | SKIP 4 | PASS 79 ]
  Error: Test failures
  Execution halted
* checking PDF version of manual ... [23s] OK
* checking HTML version of manual ... [14s] OK
* DONE
Status: 2 ERRORs