* using log directory 'd:/Rcompile/CRANpkg/local/4.4/rLakeHabitat.Rcheck' * using R version 4.4.3 (2025-02-28 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'rLakeHabitat/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'rLakeHabitat' version '1.0.1' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'rLakeHabitat' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [12s] OK * checking whether the package can be loaded with stated dependencies ... [12s] OK * checking whether the package can be unloaded cleanly ... [11s] OK * checking whether the namespace can be loaded with stated dependencies ... [11s] OK * checking whether the namespace can be unloaded cleanly ... [12s] OK * checking loading without being on the library search path ... [12s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [29s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [19s] ERROR Running examples in 'rLakeHabitat-Ex.R' failed The error most likely occurred in: > ### Name: crossValidate > ### Title: Cross Validate Interpolated Bathymetry > ### Aliases: crossValidate > > ### ** Examples > > #load example outline > outline <- terra::vect(system.file("extdata", "example_outline.shp", package = 'rLakeHabitat')) Warning: PROJ: proj_identify: Cannot find proj.db (GDAL error 1) Warning: [vect] Z coordinates ignored > #load example xyz data > data <- read.csv(system.file("extdata", "example_depths.csv", package = 'rLakeHabitat')) > #run function > crossValidate(outline, data, "x", "y", "z", zeros = FALSE, separation = 10, k = 5, crsUnit = "dd", + res = 50, method = "IDW", nmax = 4, idp = 1.5) Warning: PROJ: proj_create_from_database: Cannot find proj.db (GDAL error 1) Error: [rast] empty srs Execution halted * checking for unstated dependencies in 'tests' ... OK * checking tests ... [21s] ERROR Running 'testthat.R' [21s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(rLakeHabitat) > > test_check("rLakeHabitat") Saving _problems/test-crossValidate-52.R Saving _problems/test-interpBathy-51.R Saving _problems/test-rarify-32.R [ FAIL 3 | WARN 9 | SKIP 0 | PASS 209 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-crossValidate.R:52:3'): crossValidate output check ───────────── Error: [rast] empty srs Backtrace: ▆ 1. ├─testthat::expect_equal(...) at test-crossValidate.R:52:3 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─rLakeHabitat::crossValidate(...) 5. └─rLakeHabitat::interpBathy(...) 6. └─rLakeHabitat (local) get_res(outline, res, crsUnits) 7. ├─terra::crs("EPSG:32601") 8. └─terra::crs("EPSG:32601") 9. └─terra (local) .local(x, ...) 10. ├─terra::rast(crs = x) 11. └─terra::rast(crs = x) 12. └─terra (local) .local(x = x, ...) 13. └─terra:::new_rast(...) 14. └─terra:::messages(r, "rast") 15. └─terra:::error(f, x@pntr$getError()) ── Error ('test-interpBathy.R:51:3'): interpBathy output check ───────────────── Error: [rast] empty srs Backtrace: ▆ 1. ├─testthat::expect_s4_class(...) at test-interpBathy.R:51:3 2. │ └─testthat::quasi_label(enquo(object)) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─rLakeHabitat::interpBathy(...) 5. └─rLakeHabitat (local) get_res(outline, res, crsUnits) 6. ├─terra::crs("EPSG:32601") 7. └─terra::crs("EPSG:32601") 8. └─terra (local) .local(x, ...) 9. ├─terra::rast(crs = x) 10. └─terra::rast(crs = x) 11. └─terra (local) .local(x = x, ...) 12. └─terra:::new_rast(...) 13. └─terra:::messages(r, "rast") 14. └─terra:::error(f, x@pntr$getError()) ── Error ('test-rarify.R:32:3'): rarify output check ─────────────────────────── Error: [rast] empty srs Backtrace: ▆ 1. ├─testthat::expect_s3_class(...) at test-rarify.R:32:3 2. │ └─testthat::quasi_label(enquo(object)) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─rLakeHabitat::rarify(hull, dat, "x", "y", "z", res = 100) 5. └─rLakeHabitat (local) get_res(outline, res, crsUnits) 6. ├─terra::crs("EPSG:32601") 7. └─terra::crs("EPSG:32601") 8. └─terra (local) .local(x, ...) 9. ├─terra::rast(crs = x) 10. └─terra::rast(crs = x) 11. └─terra (local) .local(x = x, ...) 12. └─terra:::new_rast(...) 13. └─terra:::messages(r, "rast") 14. └─terra:::error(f, x@pntr$getError()) [ FAIL 3 | WARN 9 | SKIP 0 | PASS 209 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [3s] OK * checking PDF version of manual ... [18s] OK * checking HTML version of manual ... [2s] OK * DONE Status: 2 ERRORs