* using log directory 'd:/Rcompile/CRANpkg/local/4.4/DRomics.Rcheck' * using R version 4.4.0 RC (2024-04-16 r86468 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'DRomics/DESCRIPTION' ... OK * this is package 'DRomics' version '2.5-2' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'DRomics' can be installed ... OK * checking installed package size ... NOTE installed size is 6.0Mb sub-directories of 1Mb or more: doc 2.9Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [9s] OK * checking whether the package can be loaded with stated dependencies ... [9s] OK * checking whether the package can be unloaded cleanly ... [9s] OK * checking whether the namespace can be loaded with stated dependencies ... [9s] OK * checking whether the namespace can be unloaded cleanly ... [9s] OK * checking loading without being on the library search path ... [9s] OK * checking whether startup messages can be suppressed ... [8s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [27s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [59s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [159s] OK Running 'examplewithNAvalues.R' [10s] Running 'examplewithRNAseq.R' [11s] Running 'examplewithanchoringdata.R' [10s] Running 'examplewithinsitudata.R' [10s] Running 'examplewithmetabolomic.R' [11s] Running 'examplewithmicroarray.R' [11s] Running 'examplewithnoreplicate.R' [10s] Running 'testAIC.R' [9s] Running 'test_selectgroups.R' [10s] Running 'testbmdcalc.R' [9s] Running 'testbmdplotwithgradient.R' [10s] Running 'testplotfit.R' [10s] Running 'testresidualtests.R' [9s] Running 'testscaling.R' [10s] Running 'testsensitivityplot.R' [10s] Running 'testthat.R' [9s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [126s] OK * checking PDF version of manual ... [29s] OK * checking HTML version of manual ... [6s] OK * DONE Status: 1 NOTE