* using log directory 'd:/Rcompile/CRANpkg/local/4.4/ctmm.Rcheck'
* using R version 4.4.0 RC (2024-04-16 r86473 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'ctmm/DESCRIPTION' ... OK
* this is package 'ctmm' version '1.2.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'ctmm' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [24s] OK
* checking whether the package can be loaded with stated dependencies ... [23s] OK
* checking whether the package can be unloaded cleanly ... [24s] OK
* checking whether the namespace can be loaded with stated dependencies ... [23s] OK
* checking whether the namespace can be unloaded cleanly ... [23s] OK
* checking loading without being on the library search path ... [7s] OK
* checking whether startup messages can be suppressed ... [22s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [93s] OK
* checking Rd files ... [1s] NOTE
checkRd: (-1) ctmm-FAQ.Rd:28-30: Lost braces
    28 | {These are the packages I needed in Ubuntu:
       | ^
checkRd: (-1) ctmm-FAQ.Rd:34: Lost braces
    34 | {Make sure that you have the correct \code{timezone} and \code{timeformat} arguments specified. Also, see \code{\link{outlie}}.}
       | ^
checkRd: (-1) ctmm-FAQ.Rd:38: Lost braces
    38 | {\code{R} might not have installed or loaded the package correctly---e.g., some files may have failed to overwrite previous versions---or the workspace/session might be corrupted. Uninstall \code{ctmm}, restart \code{R} without saving the workspace/session, and install \code{ctmm} again.}
       | ^
checkRd: (-1) ctmm-FAQ.Rd:43-48: Lost braces
    43 | {\code{ctmm} has no recursive functions, so I am not exactly sure what causes this error, but it only occurs with certain versions of \code{R} on certain computer architectures. There are several solutions that have worked for people, including restarting \code{R} in a fresh session and updating their software. Alternatively:
       | ^
checkRd: (-1) ctmm-FAQ.Rd:52: Lost braces
    52 | {Namespace collision sometimes occurs between \code{raster}, \code{sp}, \code{move}, and \code{ctmm}. Either restart \code{R} and only load the \code{ctmm} package, or run \code{ctmm::plot} instead of \code{plot}.}
       | ^
checkRd: (-1) ctmm-FAQ.Rd:56: Lost braces
    56 | {The default projection in \code{ctmm} does not preserve the direction of North, but better preserves distances for elongated distributions. See the \code{projection} argument in \code{\link{as.telemetry}} and the example in \code{\link[ctmm]{projection}}. The \code{\link{compass}} function is also useful for pointing north.}
       | ^
checkRd: (-1) ctmm-FAQ.Rd:60: Lost braces
    60 | {Namespace collision can occur between \code{raster} and \code{ctmm}. Either restart \code{R} and only load the \code{ctmm} package, or run \code{ctmm::projection} instead of \code{projection}.}
       | ^
checkRd: (-1) ctmm-FAQ.Rd:64: Lost braces; missing escapes or markup?
    64 | {Maximize the plot window and/or increase your screen resolution.}
       | ^
checkRd: (-1) ctmm-FAQ.Rd:68: Lost braces; missing escapes or markup?
    68 | {Click the gear icon in the upper-left corner of the plot window.}
       | ^
checkRd: (-1) ctmm-FAQ.Rd:72: Lost braces
    72 | {Recent versions of \code{manipulate} and/or RStudio seem to have some issues. Sometimes the gear icon does not render unless you re-run the function 2-5 times.}
       | ^
checkRd: (-1) ctmm-FAQ.Rd:76: Lost braces
    76 | {You probably have an outdated copy of the \code{manipulate} package installed. Update \code{R} to the latest version and then update all of your packages. This seems to happen frequently with the MacOS release of \code{R}.}
       | ^
checkRd: (-1) sigfig.Rd:20: Lost braces; missing escapes or markup?
    20 |   \item{est}{Can be either confidence-interval estimates with rows {(lower-limit,point-estimate,upper-limit)} or point estimates (with \code{VAR} or \code{SD} also specified).}
       |                                                                    ^
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [5s] OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [22s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... [16s] OK
* checking HTML version of manual ... [10s] OK
* DONE
Status: 1 NOTE