* using log directory 'd:/Rcompile/CRANpkg/local/4.4/genetics.Rcheck' * using R version 4.4.0 RC (2024-04-16 r86468 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'genetics/DESCRIPTION' ... OK * this is package 'genetics' version '1.3.8.1.3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'genetics' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [0s] OK * checking loading without being on the library search path ... [1s] OK * checking whether startup messages can be suppressed ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [6s] OK * checking Rd files ... [1s] NOTE checkRd: (-1) LD.Rd:37-46: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:47-64: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:66-73: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:78-79: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:80-81: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:82-83: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:84-85: Lost braces in \itemize; meant \describe ? checkRd: (-1) LD.Rd:86-87: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:48-58: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:59-76: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:78-87: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:93-94: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:95-96: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:97-98: Lost braces in \itemize; meant \describe ? checkRd: (-1) diseq.Rd:124: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) diseq.Rd:125: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) diseq.Rd:126-128: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) diseq.Rd:129: Lost braces in \itemize; \value handles \item{}{} directly * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking examples ... [11s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [2s] OK Running 'ci.balance.R' [0s] Running 'makeGenotype_with_sep.R' [0s] Running 'test.NA.R' [0s] * checking PDF version of manual ... [20s] OK * checking HTML version of manual ... [5s] OK * DONE Status: 1 NOTE