* using log directory 'd:/Rcompile/CRANpkg/local/4.4/rchemo.Rcheck' * using R version 4.4.0 RC (2024-04-16 r86468 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'rchemo/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'rchemo' version '0.1-1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'rchemo' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking whether startup messages can be suppressed ... [0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [11s] OK * checking Rd files ... [2s] NOTE checkRd: (-1) aicplsr.Rd:35: Lost braces 35 | \item{correct}{Logical. If code{TRUE} (default), the AICc corection is applied to the criteria.} | ^ checkRd: (-1) knnda.Rd:53: Lost braces 53 | For \code{knnda}{list with input arguments} | ^ checkRd: (-1) knnr.Rd:53: Lost braces 53 | For \code{knnr}{list with input arguments} | ^ checkRd: (-1) plsda_agg.Rd:59: Lost braces 59 | the model((\code{fm})=(\code{T}): X-scores matrix; (\code{P}): X-loading matrix;(\code{R}): The PLS projection matrix (p,nlv); (\code{W}): X-loading weights matrix ;(\code{C}): The Y-loading weights matrix; (\code{TT}): the X-score normalization factor; (\code{xmeans}): the centering vector of X (p,1); (\code{ymeans}): the centering vector of Y (q,1); (\code{weights}): vector of observation weights; (\code{U}): intermediate output), \code{lev}{classes}, \code{ni}{number of observations in each class}} | ^ checkRd: (-1) plsda_agg.Rd:59: Lost braces 59 | the model((\code{fm})=(\code{T}): X-scores matrix; (\code{P}): X-loading matrix;(\code{R}): The PLS projection matrix (p,nlv); (\code{W}): X-loading weights matrix ;(\code{C}): The Y-loading weights matrix; (\code{TT}): the X-score normalization factor; (\code{xmeans}): the centering vector of X (p,1); (\code{ymeans}): the centering vector of Y (q,1); (\code{weights}): vector of observation weights; (\code{U}): intermediate output), \code{lev}{classes}, \code{ni}{number of observations in each class}} | ^ checkRd: (-1) xfit.Rd:44: Lost braces 44 | For \code{xfit}{matrix of fitted values} | ^ checkRd: (-1) xfit.Rd:46: Lost braces 46 | For \code{xresid}{matrix of residuals} | ^ * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [1s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [13s] OK * checking PDF version of manual ... [24s] OK * checking HTML version of manual ... [15s] OK * DONE Status: 1 NOTE