* using log directory 'd:/Rcompile/CRANpkg/local/4.4/tagtools.Rcheck' * using R version 4.4.0 RC (2024-04-16 r86468 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'tagtools/DESCRIPTION' ... OK * this is package 'tagtools' version '0.1.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'tagtools' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [0s] OK * checking loading without being on the library search path ... [0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [12s] OK * checking Rd files ... [1s] NOTE checkRd: (-1) check_AM.Rd:21-25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) check_AM.Rd:26-29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dive_stats.Rd:39: Lost braces; missing escapes or markup? 39 | \code{max} { The maximum depth or altitude} | ^ checkRd: (-1) dive_stats.Rd:40: Lost braces; missing escapes or markup? 40 | \code{st} {start time of dive (seconds) - from input dive_cues} | ^ checkRd: (-1) dive_stats.Rd:41: Lost braces; missing escapes or markup? 41 | \code{et} {end time of dive (seconds) - from input dive_cues} | ^ checkRd: (-1) dive_stats.Rd:42: Lost braces; missing escapes or markup? 42 | \code{dur} { The duration of the excursion} | ^ checkRd: (-1) dive_stats.Rd:43: Lost braces; missing escapes or markup? 43 | \code{dest_st} { The start time of the destination phase in seconds since start of tag recording (which is also the end time of to phase)} | ^ checkRd: (-1) dive_stats.Rd:44: Lost braces; missing escapes or markup? 44 | \code{dest_et} { The end time of the destination phase in seconds since start of tag recording (which is also the start of the from phase).} | ^ checkRd: (-1) dive_stats.Rd:45: Lost braces; missing escapes or markup? 45 | \code{dest_dur} { The duration in seconds of destination phase} | ^ checkRd: (-1) dive_stats.Rd:46: Lost braces; missing escapes or markup? 46 | \code{to_dur} { The duration in seconds of to phase} | ^ checkRd: (-1) dive_stats.Rd:47: Lost braces; missing escapes or markup? 47 | \code{from_dur} { The duration in seconds of from phase} | ^ checkRd: (-1) dive_stats.Rd:48: Lost braces 48 | \code{mean_angle} { If angular=TRUE and X is input, the mean angle for the entire excursion. Values for each phase are also provided in columns \code{mean_to_angle}, \code{mean_dest_angle}, and \code{mean_from_angle}.} | ^ checkRd: (-1) dive_stats.Rd:49: Lost braces 49 | \code{angle_var} { If angular=TRUE and X is input, the angular variance for the entire excursion. Values for each phase are also provided individually in columns \code{to_angle_var}, \code{dest_angle_var}, and \code{from_angle_var}.} | ^ checkRd: (-1) dive_stats.Rd:50: Lost braces 50 | \code{mean_aux} { If angular=FALSE and X is input, the mean value of X for the entire excursion. Values for each phase are also provided in columns \code{mean_to_aux}, \code{mean_dest_aux}, and \code{mean_from_aux}.} | ^ checkRd: (-1) dive_stats.Rd:51: Lost braces 51 | \code{aux_sd} { If angular=FALSE and X is input, the standard deviation of X for the entire excursion. Values for each phase are also provided individually in columns \code{to_aux_sd}, \code{dest_aux_sd}, and \code{from_aux_sd}.} | ^ checkRd: (-1) make_specgram.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) make_specgram.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) make_specgram.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rotation_test.Rd:42-51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rotation_test.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rotation_test.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rotation_test.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rotation_test.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rotation_test.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rotation_test.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rotation_test.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [16s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [7s] OK Running 'testthat.R' [7s] * checking PDF version of manual ... [24s] OK * checking HTML version of manual ... [13s] OK * DONE Status: 1 NOTE