Last updated on 2026-03-06 14:52:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.1 | 0.33 | 3.78 | 4.11 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.1 | 0.28 | 2.83 | 3.11 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.1 | 43.00 | 361.57 | 404.57 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.1 | 40.00 | 364.19 | 404.19 | OK | |
| r-devel-macos-arm64 | 0.1.1 | 6.00 | 87.00 | 93.00 | OK | |
| r-devel-windows-x86_64 | 0.1.1 | 25.00 | 203.00 | 228.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.1 | 22.21 | 207.07 | 229.28 | OK | |
| r-release-linux-x86_64 | 0.1.1 | 22.93 | 206.64 | 229.57 | OK | |
| r-release-macos-arm64 | 0.1.1 | 6.00 | 109.00 | 115.00 | OK | |
| r-release-macos-x86_64 | 0.1.1 | 16.00 | 274.00 | 290.00 | OK | |
| r-release-windows-x86_64 | 0.1.1 | 24.00 | 210.00 | 234.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.1 | 6.00 | 89.00 | 95.00 | OK | |
| r-oldrel-macos-x86_64 | 0.1.1 | 17.00 | 251.00 | 268.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.1 | 34.00 | 336.00 | 370.00 | OK |
Version: 0.1.1
Check: package dependencies
Result: ERROR
Package required but not available: ‘biomaRt’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.1.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'annotaR-workflow.Rmd' using rmarkdown
Quitting from annotaR-workflow.Rmd:45-56 [annotation]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/httr2_failure>
Error in `req_perform()`:
! Failed to perform HTTP request.
Caused by error in `curl::curl_fetch_memory()`:
! Timeout was reached [www.ensembl.org]:
Operation timed out after 10014 milliseconds with 0 bytes received
---
Backtrace:
▆
1. ├─... %>% add_drug_links()
2. ├─annotaR::add_drug_links(.)
3. │ └─"gene" %in% names(annotaR_object)
4. └─annotaR::add_disease_links(.)
5. ├─biomaRt::getBM(...)
6. │ └─biomaRt:::martCheck(mart)
7. └─biomaRt::useEnsembl("genes", "hsapiens_gene_ensembl")
8. └─biomaRt:::.listEnsembl(version = version, GRCh = GRCh, mirror = mirror)
9. └─biomaRt:::.currentEnsemblVersion()
10. └─biomaRt::listEnsemblArchives()
11. └─biomaRt:::.listEnsemblArchives(http_config = list())
12. └─biomaRt:::.checkArchiveList(http_config)
13. └─biomaRt:::.getArchiveList(http_config = http_config)
14. └─httr2::req_perform(html_request)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'annotaR-workflow.Rmd' failed with diagnostics:
Failed to perform HTTP request.
Caused by error in `curl::curl_fetch_memory()`:
! Timeout was reached [www.ensembl.org]:
Operation timed out after 10014 milliseconds with 0 bytes received
--- failed re-building 'annotaR-workflow.Rmd'
SUMMARY: processing the following file failed:
'annotaR-workflow.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64