Last updated on 2026-01-02 09:50:12 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.50 | 270.59 | 283.09 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.81 | 204.59 | 214.40 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 193.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.71 | 269.87 | 284.58 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.00 | 255.84 | 270.84 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 165.00 | 175.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 295.00 | 306.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 248.00 | 271.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.639, system: 0.044, elapsed: 2.178 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.737, system: 0.130, elapsed: 12.506 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.018, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.387, system: 0.426, elapsed: 5.480 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.006, elapsed: 0.231 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.710, system: 0.648, elapsed: 21.419 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.642, system: 0.052, elapsed: 1.956 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.587, system: 0.136, elapsed: 11.515 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.014, elapsed: 0.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.454, system: 0.414, elapsed: 5.532 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.005, elapsed: 0.229 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.613, system: 0.651, elapsed: 20.196 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.610, system: 0.040, elapsed: 4.143 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.617, system: 0.099, elapsed: 21.707 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.015, elapsed: 0.407 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.513, system: 0.424, elapsed: 7.595 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.005, elapsed: 0.259 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.231, system: 0.224, elapsed: 1.047 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.036, system: 0.848, elapsed: 36.561 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.614, system: 0.042, elapsed: 2.227 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.595, system: 0.097, elapsed: 12.359 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.013, elapsed: 0.227 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.490, system: 0.424, elapsed: 5.777 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.007, elapsed: 0.232 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.918, system: 0.578, elapsed: 14.502 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.710, system: 1.183, elapsed: 36.191 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [89s/221s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.772, system: 0.082, elapsed: 2.917 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.988, system: 0.340, elapsed: 15.949 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.022, elapsed: 0.307 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.540, system: 0.582, elapsed: 7.181 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.012, elapsed: 0.273 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.251, system: 1.078, elapsed: 27.506 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.848, system: 0.094, elapsed: 7.674 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.579, system: 0.127, elapsed: 29.641 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.016, elapsed: 0.601 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.327, system: 0.421, elapsed: 12.735 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.385 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.699, system: 0.691, elapsed: 52.488 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.604, system: 0.039, elapsed: 4.328 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.605, system: 0.075, elapsed: 26.079 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.015, elapsed: 0.723 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.412, system: 0.430, elapsed: 14.063 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.004, elapsed: 0.499 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.181, system: 0.309, elapsed: 2.144 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.850, system: 0.900, elapsed: 49.607 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.034, elapsed: 4.683 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.580, system: 0.072, elapsed: 27.125 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.015, elapsed: 0.598 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.329, system: 0.438, elapsed: 13.974 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.419 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.734, system: 0.530, elapsed: 30.648 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.292, system: 1.118, elapsed: 79.415 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64