RepeatABEL: GWAS for Multiple Observations on Related Individuals

Performs genome-wide association studies (GWAS) on individuals that are both related and have repeated measurements. For each Single Nucleotide Polymorphism (SNP), it computes score statistic based p-values for a linear mixed model including random polygenic effects and a random effect for repeated measurements. The computed p-values can be visualized in a Manhattan plot. For more details see Ronnegard et al. (2016) <doi:10.1111/2041-210X.12535> and for more examples see <https://github.com/larsronn/RepeatABEL_Tutorials>.

Version:	2.0
Depends:	hglm, methods
Published:	2026-01-06
DOI:	10.32614/CRAN.package.RepeatABEL
Author:	Lars Ronnegard [aut, cre]
Maintainer:	Lars Ronnegard <lars.ronnegard at slu.se>
License:	GPL-2 | GPL-3 [expanded from: GPL]
NeedsCompilation:	no
Citation:	RepeatABEL citation info
Materials:	NEWS
CRAN checks:	RepeatABEL results

Documentation:

Reference manual:

RepeatABEL.html , RepeatABEL.pdf

Downloads:

Package source:	RepeatABEL_2.0.tar.gz
Windows binaries:	r-devel: RepeatABEL_2.0.zip, r-release: RepeatABEL_2.0.zip, r-oldrel: RepeatABEL_2.0.zip
macOS binaries:	r-release (arm64): RepeatABEL_2.0.tgz, r-oldrel (arm64): RepeatABEL_2.0.tgz, r-release (x86_64): RepeatABEL_2.0.tgz, r-oldrel (x86_64): RepeatABEL_2.0.tgz
Old sources:	RepeatABEL archive

Linking:

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