## ---- include = FALSE--------------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) ## ----setup,echo=FALSE,message=FALSE,warning=FALSE----------------------------- library(mort) library(ggplot2) ## ----alive_ex,echo=FALSE,results=FALSE,fig.width=7---------------------------- new.events<-rbind(events,new.data) morts<-morts(data=events,type="mort",ID="ID",station="Station.Name", method="all") plot<-mortsplot(data=new.events,type="mort",ID="ID",station="Station.Name", morts=morts) plot<-plot+ geom_vline(aes(xintercept=as.POSIXct("2006-10-25")),linetype="dashed")+ theme(legend.position="none") plot ## ----rev_ex,results=FALSE----------------------------------------------------- review_example<-review(morts=morts,new.data=new.data,type="mort", ID="ID",station="Station.Name") ## ----rev_ex_table,echo=FALSE-------------------------------------------------- row.names(review_example)<-NULL knitr::kable(review_example,align="c") ## ----old_data,eval=FALSE------------------------------------------------------ # review_example<-review(morts=morts,new.data=new.data,old.data=events, # type="mort",ID="ID",station="Station.Name") ## ----rev_drift,eval=FALSE----------------------------------------------------- # drift_review<-review(morts=morts,new.data=new.data,old.data=old.data, # type="morts",ID="ID",station="Station.Name", # res.end="auto",residences="auto",units="auto", # ddd=ddd,from.station="From",to.station="To")