See download stats for: Bioconductor software packages Bioconductor experiment packages Bioconductor workflow packages

Download stats for Bioconductor annotation packages

This page was generated on 2024-05-15 07:38:13 -0400 (Wed, 15 May 2024).

The number reported next to each package name is the download score, that is, the average number of distinct IPs that “hit” the package each month for the last 12 months (not counting the current month).

Top 30

1	GenomeInfoDbData (51570)
2	GO.db (21171)
3	org.Hs.eg.db (17127)
4	HDO.db (13055)
5	org.Mm.eg.db (7686)
6	TxDb.Hsapiens.UCSC.hg19.knownGene (4794)
7	BSgenome.Hsapiens.UCSC.hg38 (3686)
8	reactome.db (3114)
9	BSgenome.Hsapiens.UCSC.hg19 (2909)
10	TxDb.Hsapiens.UCSC.hg38.knownGene (2660)

11	EnsDb.Hsapiens.v86 (2647)
12	DO.db (2236)
13	hgu133plus2.db (1702)
14	org.Rn.eg.db (1556)
15	TxDb.Mmusculus.UCSC.mm10.knownGene (1416)
16	HPO.db (1355)
17	FDb.InfiniumMethylation.hg19 (1346)
18	IlluminaHumanMethylation450kanno.ilmn12.hg19 (1331)
19	JASPAR2020 (1307)
20	MPO.db (1194)

21	IlluminaHumanMethylation450kmanifest (1163)
22	BSgenome.Mmusculus.UCSC.mm10 (1163)
23	Homo.sapiens (1134)
24	IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (1086)
25	IlluminaHumanMethylationEPICmanifest (1073)
26	org.Dm.eg.db (1071)
27	SNPlocs.Hsapiens.dbSNP144.GRCh37 (926)
28	hgu133a.db (855)
29	BSgenome.Hsapiens.1000genomes.hs37d5 (844)
30	EnsDb.Hsapiens.v75 (826)

All annotation packages

All annotation package stats in one file: annotation_pkg_stats.tab

All annotation package download scores in one file: annotation_pkg_scores.tab

See Download stats for Bioconductor annotation repository (all packages combined)

4

4.10.1 (1)

A

	ABAData (1)
	abc (1)
	abind (1)
	ace.fma (1)
	acepack (2)
	actuar (1)
	ada (1)
	adabag (1)
	AdaptGauss (1)
	ade4 (4)
	adegenet (1)
	adegraphics (1)
	adephylo (1)
	ADGofTest (1)
	aditools (1)
	adjustedCurves (1)
	adme16cod (1)
	adme16cod.db (22)
	admiral (1)
	admiral.test (1)
	admiraldev (1)
	admisc (29)
	ADMM (1)
	AER (1)
	afex (1)
	affxparser (0)
	affy (1)
	affycoretools (0)
	affyio (1)
	affyPLM (1)
	ag (1)
	ag.db (23)
	agahomology (1)
	agcdf (19)
	AGHmatrix (1)
	AgiMicroRna (0)
	agprobe (18)
	agricolae (6)
	AHCytoBands (15)
	AHEnsDbs (22)
	AHLRBaseDbs (21)
	AHMeSHDbs (26)
	AHPathbankDbs (18)
	AHPubMedDbs (23)
	AHWikipathwaysDbs (17)
	AICcmodavg (1)
	AIPW (1)
	airr (1)
	airway (1)
	akima (1)
	alabama (1)
	alakazam (1)
	ald (1)
	ALDEx2 (1)
	aldvmm (1)
	alembic (1)
	AlgDesign (1)
	alkahest.generic (1)
	ALL (10)
	alluvial (1)
	almanac (1)
	alphahull (1)
	AlphaMissense.v2023.hg19 (7)
	AlphaMissense.v2023.hg38 (10)
	alphashape3d (1)
	alr4 (1)
	altair (1)
	alternativeSplicingEvents.hg19 (18)
	alternativeSplicingEvents.hg38 (20)
	amap (1)
	AMARETTO (0)
	ambient (1)
	Amelia (1)
	AmesHousing (1)
	amgen.okta.client (1)
	amgsafetyvis (1)
	amlogger (1)
	ANCOMBC (1)
	angrycell (1)
	animation (2)
	annaffy (0)
	anndata (1)
	annotate (2)

	AnnotationDbi (23)
	AnnotationFilter (1)
	AnnotationForge (1)
	AnnotationHub (2)
	AnnotationHubData (1)
	annotatr (1)
	anopheles.db0 (22)
	anRichment (1)
	anticlust (1)
	AnVIL (0)
	anytime (5)
	aod (1)
	apcluster (1)
	APCtools (1)
	ape (20)
	apeglm (1)
	apex (1)
	apexcharter (1)
	APL (1)
	aplot (36)
	appgen (1)
	aqp (1)
	arabidopsis.db0 (29)
	archive (1)
	ArchR (1)
	argparse (10)
	argus.DS.Credentials (2)
	argusDS.apc.utils (2)
	argusDS.backtesting.engine (2)
	argusDS.data (2)
	argusDS.data.engineering (1)
	argusDS.data.preparation (2)
	argusDS.data.preparation2 (3)
	argusDS.data.visualisation (1)
	argusDS.database (1)
	argusDS.DataValidation (1)
	argusDS.DB.manager.utilities (2)
	argusDS.distributions (1)
	argusDS.driver.importance (2)
	argusDS.FCUtilities (1)
	argusDS.FZ.SourceData (1)
	argusDS.FZ.utils (1)
	argusDS.gamboostLSS (1)
	argusDS.gamlss.distributions (1)
	argusDS.gamlss.forecast (2)
	argusDS.gamlss.modelling (2)
	argusDS.gamlss.smoothers (1)
	argusDS.gamlss.testing (3)
	argusDS.gamlss.utils (2)
	argusDS.GlobalSettings (1)
	argusDS.model.testing (1)
	argusDS.model.tools (2)
	argusDS.model.validation (1)
	argusDS.modeldb (1)
	argusDS.possibility.curves.daily (1)
	argusDS.PossibilityCurves.db.utils (1)
	argusDS.PossibilityCurves.utils (1)
	argusDS.S3 (1)
	argusDS.shiny.utils (2)
	argusDS.signal.dataprep (1)
	argusDS.smoothers (1)
	argusDS.spread.trading.utils (2)
	argusDS.Studio.APC (1)
	argusDS.Studio.FC (1)
	argusDS.Studio.MyStudio (2)
	argusDS.Studio.permissions (1)
	argusDS.Studio.utils (2)
	argusDS.tabulator (1)
	argusDS.trading.optimization (1)
	argusDS.trading.performance (2)
	argusDS.TradingSignals (1)
	argusDS.UI (1)
	argusDS.utilities (1)
	aricode (1)
	arm (1)
	aroma.affymetrix (8)
	aroma.apd (8)
	aroma.core (8)
	ArrayExpress (1)
	arrayhelpers (1)
	arrayop (1)
	arrow (18)
	arsenal (1)

	arules (15)
	ArvadosR (1)
	arvupload (1)
	ascii (1)
	asciicast (1)
	ASExtras4 (0)
	ash (6)
	ashr (2)
	asht (1)
	AsioHeaders (5)
	askpass (162)
	asremlPlus (1)
	assert (1)
	assertive (1)
	assertive.code (1)
	assertive.data (1)
	assertive.data.uk (1)
	assertive.data.us (1)
	assertive.datetimes (1)
	assertive.properties (11)
	assertive.reflection (1)
	assertive.strings (1)
	assertive.types (11)
	assertr (2)
	assertthat (2)
	ASSET (1)
	AssotesteR (1)
	astsa (1)
	ATACseqQC (1)
	ATE (1)
	atgenomeatrefseq (1)
	atgenomeatrefseq7cdf (1)
	atgenomeatrefseq7probe (1)
	atgenomeatrefseqcdf (1)
	atgenomeatrefseqprobe (1)
	atgenomeattair (1)
	atgenomeattaircdf (1)
	atgenomeattairprobe (1)
	atgenomeattigr (1)
	atgenomeattigr7cdf (1)
	atgenomeattigr7probe (1)
	atgenomeattigrcdf (1)
	atgenomeattigrprobe (1)
	ath1121501 (1)
	ath1121501.db (53)
	ath1121501cdf (51)
	ath1121501frmavecs (1)
	ath1121501probe (21)
	ath1atrefseq (1)
	ath1atrefseq7cdf (1)
	ath1atrefseq7probe (1)
	ath1atrefseqcdf (1)
	ath1atrefseqprobe (1)
	ath1attair (1)
	ath1attaircdf (1)
	ath1attairprobe (1)
	ath1attigr (1)
	ath1attigr7cdf (1)
	ath1attigr7probe (1)
	ath1attigrcdf (1)
	ath1attigrprobe (1)
	athhomology (1)
	ATR (1)
	attachment (4)
	attempt (1)
	AUC (1)
	AUCell (1)
	audio (1)
	audited (1)
	av (1)
	ava2 (1)
	aws (1)
	aws.ec2metadata (1)
	aws.s3 (6)
	aws.signature (5)
	awsMethods (1)
	azcore (1)
	Azimuth (1)
	AzureAuth (1)
	AzureGraph (4)
	AzureRMR (4)
	AzureStor (1)

B

	babelgene (3)
	babelmixr2 (1)
	babelwhale (1)
	babynames (1)
	backbone (1)
	backports (56)
	badger (0)
	baguette (1)
	bain (1)
	BalancedSampling (1)
	ballgown (0)
	bambu (1)
	BANDITS (0)
	barley1cdf (18)
	barley1probe (17)
	BART (1)
	bartMachine (1)
	bartMachineJARs (1)
	base (0)
	base2grob (1)
	base64 (3)
	base64enc (2)
	base64url (1)
	basefun (1)
	basemaps (1)
	BASiCS (1)
	basilisk (1)
	basilisk.utils (1)
	batchelor (1)
	BatchJobs (1)
	batchtools (1)
	battenberg (1)
	BayesFactor (2)
	BayesFM (1)
	bayesm (9)
	bayesmeta (1)
	bayesplot (10)
	BayesPostEst (1)
	bayesQR (1)
	bayestestR (3)
	BayesX (1)
	baySeq (7)
	BB (1)
	BBmisc (1)
	bbmle (9)
	bbotk (1)
	bbr (1)
	bbr.bayes (1)
	bcellViper (0)
	bcp (1)
	bdsmatrix (7)
	BE (1)
	beachmat (2)
	beadarray (1)
	beanplot (1)
	beepr (1)
	beeswarm (1)
	bench (1)
	benchmarkme (1)
	benchmarkmeData (1)
	benchr (1)
	berryFunctions (1)
	Bessel (1)
	bestglm (1)
	bestNormalize (2)
	betareg (1)
	bettermc (0)
	bezier (1)
	BgeeDB (1)
	BGLR (1)
	BH (153)
	BIApylon (1)
	BiasedUrn (12)
	BIAutils (1)
	bibtex (2)
	biclust (1)
	bife (1)
	biganalytics (1)
	bigassertr (1)
	bigD (1)
	bigdist (1)
	BIGL (1)
	biglasso (1)
	biglm (1)
	biglmm (1)
	bigmemory (1)
	bigmemory.sri (1)
	bigparallelr (1)
	bigreadr (0)
	bigrquery (15)
	bigsnpr (0)
	bigsparser (0)
	bigstatsr (1)
	bigutils (0)
	bigutilsr (1)
	billboarder (8)
	bindr (1)
	bindrcpp (1)
	binGroup (1)
	binman (1)
	binom (1)
	binr (0)
	bio3d (3)
	biobank (1)
	Biobase (7)
	BioBase (1)
	bioc::GenomeInfoDbData (0)
	BiocBaseUtils (1)
	BiocCheck (1)
	BiocFileCache (4)
	BiocGenerics (28)
	BiocInstaller (1)
	BiocIO (1)
	BiocManager (184)
	BiocNeighbors (2)
	Bioconductor (1)
	bioconductor (1)
	BiocParallel (19)
	BiocSingular (2)
	BiocSklearn (0)
	BiocStyle (1)

	BiocVersion (34)
	biocViews (1)
	BiocWorkflowTools (0)
	BioEnricher (1)
	Biogenerics (1)
	BioGenerics (1)
	biomaRt (2)
	BioMartGOGeneSets (17)
	biomartr (1)
	biomformat (1)
	biostat3 (1)
	biostatR (1)
	biostatUtil (0)
	Biostring (1)
	Biostrings (15)
	biotools (1)
	BioVersion (0)
	biovizBase (1)
	BiplotML (1)
	bit (58)
	bit64 (12)
	bitops (13)
	bizdays (2)
	bkbutils (1)
	BlakerCI (1)
	blastula (1)
	blavaan (1)
	blme (6)
	blob (104)
	blockcluster (1)
	blockForest (1)
	blockmodeling (1)
	blogdown (1)
	bluster (0)
	BMA (1)
	bmcite.SeuratData (1)
	BMisc (1)
	bmp (1)
	bnlearn (1)
	BOIN (1)
	bold (1)
	bookdown (37)
	Boom (1)
	boomer (1)
	BoomSpikeSlab (1)
	boot (56)
	bootstrap (1)
	botor (1)
	bovine.db (22)
	bovine.db0 (31)
	bovinecdf (20)
	bovineprobe (19)
	box (8)
	bpcp (1)
	BPSC (1)
	BradleyTerry2 (1)
	brave (1)
	brew (71)
	brglm (1)
	brglm2 (1)
	bricks (1)
	brickster (1)
	BridgeDbR (1)
	bridgesampling (1)
	brio (62)
	brms (1)
	brmsmargins (1)
	Brobdingnag (1)
	broman (1)
	broom (103)
	broom.helpers (4)
	broom.mixed (1)
	broomExtra (1)
	BrowserViz (1)
	bs4Dash (10)
	BSgenome (2)
	BSGenome (1)
	BSgenome.Alyrata.JGI.v1 (18)
	BSgenome.Amellifera.BeeBase.assembly4 (22)
	BSgenome.Amellifera.NCBI.AmelHAv3.1 (17)
	BSgenome.Amellifera.UCSC.apiMel2 (29)
	BSgenome.Amellifera.UCSC.apiMel2.masked (17)
	BSgenome.Aofficinalis.NCBI.V1 (17)
	BSgenome.Athaliana.TAIR.01222004 (1)
	BSgenome.Athaliana.TAIR.04232008 (23)
	BSgenome.Athaliana.TAIR.TAIR9 (70)
	BSgenome.Btaurus.UCSC.bosTau3 (37)
	BSgenome.Btaurus.UCSC.bosTau3.masked (15)
	BSgenome.Btaurus.UCSC.bosTau4 (34)
	BSgenome.Btaurus.UCSC.bosTau4.masked (16)
	BSgenome.Btaurus.UCSC.bosTau6 (83)
	BSgenome.Btaurus.UCSC.bosTau6.masked (72)
	BSgenome.Btaurus.UCSC.bosTau8 (25)
	BSgenome.Btaurus.UCSC.bosTau9 (36)
	BSgenome.Btaurus.UCSC.bosTau9.masked (15)
	BSgenome.Carietinum.NCBI.v1 (17)
	BSgenome.Celegans.UCSC.ce10 (66)
	BSgenome.Celegans.UCSC.ce11 (166)
	BSgenome.Celegans.UCSC.ce2 (351)
	BSgenome.Celegans.UCSC.ce6 (22)
	BSgenome.Cfamiliaris.UCSC.canFam2 (30)
	BSgenome.Cfamiliaris.UCSC.canFam2.masked (16)
	BSgenome.Cfamiliaris.UCSC.canFam3 (69)
	BSgenome.Cfamiliaris.UCSC.canFam3.masked (18)
	BSgenome.Cjacchus.UCSC.calJac3 (17)
	BSgenome.Cjacchus.UCSC.calJac4 (33)
	BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 (15)
	BSgenome.Creinhardtii.JGI.v5.6 (18)
	BSgenome.Dmelanogaster.BDGP.Release5 (1)
	BSgenome.Dmelanogaster.FlyBase.r51 (1)
	BSgenome.Dmelanogaster.UCSC.dm2 (49)
	BSgenome.Dmelanogaster.UCSC.dm2.masked (17)
	BSgenome.Dmelanogaster.UCSC.dm3 (227)
	BSgenome.Dmelanogaster.UCSC.dm3.masked (18)
	BSgenome.Dmelanogaster.UCSC.dm6 (182)
	BSgenome.Drerio.UCSC.danRer10 (159)
	BSgenome.Drerio.UCSC.danRer11 (63)
	BSgenome.Drerio.UCSC.danRer5 (29)
	BSgenome.Drerio.UCSC.danRer5.masked (15)
	BSgenome.Drerio.UCSC.danRer6 (27)
	BSgenome.Drerio.UCSC.danRer6.masked (16)

	BSgenome.Drerio.UCSC.danRer7 (219)
	BSgenome.Drerio.UCSC.danRer7.masked (16)
	BSgenome.Dvirilis.Ensembl.dvircaf1 (14)
	BSgenome.Ecoli.NCBI.20080805 (234)
	BSgenome.Gaculeatus.UCSC.gasAcu1 (29)
	BSgenome.Gaculeatus.UCSC.gasAcu1.masked (15)
	BSgenome.Ggallus.ENSEMBL.galGal6 (1)
	BSgenome.Ggallus.UCSC.galGal3 (111)
	BSgenome.Ggallus.UCSC.galGal3.masked (16)
	BSgenome.Ggallus.UCSC.galGal4 (32)
	BSgenome.Ggallus.UCSC.galGal4.masked (15)
	BSgenome.Ggallus.UCSC.galGal5 (17)
	BSgenome.Ggallus.UCSC.galGal6 (33)
	BSgenome.Gmax.NCBI.Gmv40 (17)
	BSgenome.Hsapiens.1000genomes.hs37d5 (844)
	BSgenome.Hsapiens.1000genomes.hs38d5 (1)
	BSgenome.Hsapiens.1000genomes.hs3d5 (1)
	BSgenome.Hsapiens.NCBI.b36v3 (1)
	BSgenome.Hsapiens.NCBI.GRCh38 (774)
	BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 (43)
	BSgenome.Hsapiens.UCSC.hg1 (0)
	BSgenome.Hsapiens.UCSC.hg16 (1)
	BSgenome.Hsapiens.UCSC.hg17 (29)
	BSgenome.Hsapiens.UCSC.hg17.masked (16)
	BSgenome.Hsapiens.UCSC.hg18 (224)
	BSgenome.Hsapiens.UCSC.hg18.masked (64)
	BSgenome.Hsapiens.UCSC.hg19 (2909)
	bsgenome.hsapiens.ucsc.hg19 (1)
	BSgenome.Hsapiens.UCSC.hg19.masked (148)
	BSgenome.Hsapiens.UCSC.hg38 (3686)
	BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major (25)
	BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor (21)
	BSgenome.Hsapiens.UCSC.hg38.masked (193)
	BSgenome.Hsapiens.UCSC.hs1 (21)
	BSgenome.Hsapiens.UCSC.mm10 (0)
	BSgenome.Mdomestica.UCSC.monDom5 (16)
	BSgenome.Mfascicularis.NCBI.5.0 (25)
	BSgenome.Mfascicularis.NCBI.6.0 (20)
	BSgenome.Mfuro.UCSC.musFur1 (17)
	BSgenome.Mmul10.SIVmac251 (1)
	BSgenome.Mmulatta.NCBI.mmul10.tmp (1)
	BSgenome.Mmulatta.UCSC.rheMac10 (152)
	BSgenome.Mmulatta.UCSC.rheMac2 (30)
	BSgenome.Mmulatta.UCSC.rheMac2.masked (15)
	BSgenome.Mmulatta.UCSC.rheMac3 (30)
	BSgenome.Mmulatta.UCSC.rheMac3.masked (15)
	BSgenome.Mmulatta.UCSC.rheMac8 (85)
	BSgenome.Mmusculus.UCSC.hg38 (1)
	BSgenome.Mmusculus.UCSC.mm10 (1163)
	Bsgenome.Mmusculus.UCSC.mm10 (1)
	BSgenome.Mmusculus.UCSC.mm10.masked (72)
	BSgenome.Mmusculus.UCSC.mm19 (1)
	BSgenome.Mmusculus.UCSC.mm1z (1)
	BSgenome.Mmusculus.UCSC.mm39 (102)
	BSgenome.Mmusculus.UCSC.mm6 (1)
	BSgenome.Mmusculus.UCSC.mm7 (1)
	BSgenome.Mmusculus.UCSC.mm8 (98)
	BSgenome.Mmusculus.UCSC.mm8.masked (93)
	BSgenome.Mmusculus.UCSC.mm9 (372)
	BSgenome.Mmusculus.UCSC.mm9.masked (43)
	BSgenome.Omela.CUSTOM.oenMel1.1 (1)
	BSgenome.Osativa.MSU.MSU7 (36)
	BSgenome.Ppaniscus.UCSC.panPan1 (15)
	BSgenome.Ppaniscus.UCSC.panPan2 (22)
	BSgenome.Ptroglodytes.UCSC.panTro2 (27)
	BSgenome.Ptroglodytes.UCSC.panTro2.masked (16)
	BSgenome.Ptroglodytes.UCSC.panTro3 (28)
	BSgenome.Ptroglodytes.UCSC.panTro3.masked (26)
	BSgenome.Ptroglodytes.UCSC.panTro5 (17)
	BSgenome.Ptroglodytes.UCSC.panTro6 (17)
	BSgenome.Rnorvegicus.UCSC.rn4 (53)
	BSgenome.Rnorvegicus.UCSC.rn4.masked (20)
	BSgenome.Rnorvegicus.UCSC.rn5 (157)
	BSgenome.Rnorvegicus.UCSC.rn5.masked (38)
	BSgenome.Rnorvegicus.UCSC.rn6 (134)
	BSgenome.Rnorvegicus.UCSC.rn7 (113)
	BSgenome.Scerevisiae.UCSC.sacCer1 (148)
	BSgenome.Scerevisiae.UCSC.sacCer2 (185)
	BSgenome.Scerevisiae.UCSC.sacCer3 (209)
	BSgenome.Sscrofa.UCSC.susScr11 (36)
	BSgenome.Sscrofa.UCSC.susScr3 (26)
	BSgenome.Sscrofa.UCSC.susScr3.masked (16)
	BSgenome.Tgondii.ToxoDB.7.0 (20)
	BSgenome.Tguttata.UCSC.taeGut1 (25)
	BSgenome.Tguttata.UCSC.taeGut1.masked (14)
	BSgenome.Tguttata.UCSC.taeGut2 (15)
	BSgenome.Vvinifera.URGI.IGGP12Xv0 (15)
	BSgenome.Vvinifera.URGI.IGGP12Xv2 (19)
	BSgenome.Vvinifera.URGI.IGGP8X (15)
	BSgenomes (1)
	bsicons (2)
	bslib (270)
	bsplus (1)
	bsseq (0)
	bsts (1)
	bsubtiliscdf (17)
	bsubtilisprobe (16)
	btahomology (1)
	btbovinebtense (1)
	btbovinebtensecdf (1)
	btbovinebtenseprobe (1)
	btbovinebtensg (1)
	btbovinebtensgcdf (1)
	btbovinebtensgprobe (1)
	btbovinebtenst (1)
	btbovinebtenstcdf (1)
	btbovinebtenstprobe (1)
	btbovinebtentrezg (1)
	btbovinebtentrezgcdf (1)
	btbovinebtentrezgprobe (1)
	btbovinebtrefseq (1)
	btbovinebtrefseqcdf (1)
	btbovinebtrefseqprobe (1)
	btbovinebtug (1)
	btbovinebtugcdf (1)
	btbovinebtugprobe (1)
	btergm (1)
	bumphunter (1)
	butcher (2)
	bvls (1)
	BWStest (1)

C

	C50 (1)
	ca (4)
	CAbiNet (1)
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	hs133pptentrezgprobe (1)
	hs133pptrefseq (1)
	hs133pptrefseqcdf (1)
	hs133pptrefseqprobe (1)
	hs133xhsense (1)
	hs133xhsense7cdf (1)
	hs133xhsense7probe (1)
	hs133xhsensecdf (1)
	hs133xhsenseprobe (1)
	hs133xhsensg (1)
	hs133xhsensg7cdf (1)
	hs133xhsensg7probe (1)
	hs133xhsensgcdf (1)
	hs133xhsensgprobe (1)
	hs133xhsenst (1)
	hs133xhsenst7cdf (1)
	hs133xhsenst7probe (1)
	hs133xhsenstcdf (1)
	hs133xhsenstprobe (1)
	hs133xhsentrezg (1)
	hs133xhsentrezg7cdf (1)
	hs133xhsentrezg7probe (1)
	hs133xhsentrezgcdf (1)
	hs133xhsentrezgprobe (1)
	hs133xhsrefseq (1)
	hs133xhsrefseq7cdf (1)
	hs133xhsrefseq7probe (1)
	hs133xhsrefseqcdf (1)
	hs133xhsrefseqprobe (1)
	hs133xhsug (1)
	hs133xhsug7cdf (1)
	hs133xhsug7probe (1)
	hs133xhsugcdf (1)
	hs133xhsugprobe (1)
	hs133xhsvegae (1)
	hs133xhsvegaecdf (1)
	hs133xhsvegaeprobe (1)
	hs133xhsvegag (1)
	hs133xhsvegagcdf (1)
	hs133xhsvegagprobe (1)
	hs133xhsvegat (1)
	hs133xhsvegatcdf (1)
	hs133xhsvegatprobe (1)
	hs133xptense (1)
	hs133xptense7cdf (1)
	hs133xptense7probe (1)
	hs133xptensecdf (1)
	hs133xptenseprobe (1)
	hs133xptensg (1)
	hs133xptensg7cdf (1)
	hs133xptensg7probe (1)
	hs133xptensgcdf (1)
	hs133xptensgprobe (1)
	hs133xptenst (1)
	hs133xptenstcdf (1)
	hs133xptenstprobe (1)
	hs133xptentrezg (1)
	hs133xptentrezgcdf (1)
	hs133xptentrezgprobe (1)
	hs133xptrefseq (1)
	hs133xptrefseqcdf (1)
	hs133xptrefseqprobe (1)
	hs25kresogen (1)
	hs25kresogen.db (17)
	Hs6UG171.db (19)
	hs95av2hsense (1)
	hs95av2hsense7cdf (1)
	hs95av2hsense7probe (1)
	hs95av2hsensecdf (1)
	hs95av2hsenseprobe (1)
	hs95av2hsensg (1)
	hs95av2hsensg7cdf (1)
	hs95av2hsensg7probe (1)
	hs95av2hsensgcdf (1)
	hs95av2hsensgprobe (1)
	hs95av2hsenst (1)
	hs95av2hsenst7cdf (1)
	hs95av2hsenst7probe (1)
	hs95av2hsenstcdf (1)
	hs95av2hsenstprobe (1)
	hs95av2hsentrezg (1)
	hs95av2hsentrezg7cdf (1)
	hs95av2hsentrezg7probe (1)
	hs95av2hsentrezgcdf (1)
	hs95av2hsentrezgprobe (1)
	hs95av2hsrefseq (1)
	hs95av2hsrefseq7cdf (1)
	hs95av2hsrefseq7probe (1)
	hs95av2hsrefseqcdf (1)
	hs95av2hsrefseqprobe (1)
	hs95av2hsug (1)
	hs95av2hsug7cdf (1)
	hs95av2hsug7probe (1)
	hs95av2hsugcdf (1)
	hs95av2hsugprobe (1)
	hs95av2hsvegae (1)
	hs95av2hsvegaecdf (1)
	hs95av2hsvegaeprobe (1)
	hs95av2hsvegag (1)
	hs95av2hsvegagcdf (1)
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	hs95av2hsvegat (1)
	hs95av2hsvegatcdf (1)
	hs95av2hsvegatprobe (1)
	hs95av2ptense (1)
	hs95av2ptense7cdf (1)
	hs95av2ptense7probe (1)
	hs95av2ptensecdf (1)
	hs95av2ptenseprobe (1)
	hs95av2ptensg (1)
	hs95av2ptensg7cdf (1)
	hs95av2ptensg7probe (1)
	hs95av2ptensgcdf (1)
	hs95av2ptensgprobe (1)

	hs95av2ptenst (1)
	hs95av2ptenstcdf (1)
	hs95av2ptenstprobe (1)
	hs95av2ptentrezg (1)
	hs95av2ptentrezgcdf (1)
	hs95av2ptentrezgprobe (1)
	hs95av2ptrefseq (1)
	hs95av2ptrefseqcdf (1)
	hs95av2ptrefseqprobe (1)
	HsAgilentDesign026652.db (40)
	hsahomology (1)
	HsapiensGenome.hg16 (1)
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	HSAUR2 (1)
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	hsex10stv2hsense (1)
	hsex10stv2hsense7cdf (1)
	hsex10stv2hsense7probe (1)
	hsex10stv2hsensecdf (1)
	hsex10stv2hsenseprobe (1)
	hsex10stv2hsensg (1)
	hsex10stv2hsensg7cdf (1)
	hsex10stv2hsensg7probe (1)
	hsex10stv2hsensgcdf (1)
	hsex10stv2hsensgprobe (1)
	hsex10stv2hsenst (1)
	hsex10stv2hsenst7cdf (1)
	hsex10stv2hsenst7probe (1)
	hsex10stv2hsenstcdf (1)
	hsex10stv2hsenstprobe (2)
	hsex10stv2hsentrezg (1)
	hsex10stv2hsentrezg7cdf (1)
	hsex10stv2hsentrezg7probe (1)
	hsex10stv2hsentrezgcdf (1)
	hsex10stv2hsentrezgprobe (1)
	hsex10stv2hsrefseq (1)
	hsex10stv2hsrefseq7cdf (1)
	hsex10stv2hsrefseq7probe (1)
	hsex10stv2hsrefseqcdf (1)
	hsex10stv2hsrefseqprobe (1)
	hsex10stv2hsug (1)
	hsex10stv2hsug7cdf (1)
	hsex10stv2hsug7probe (1)
	hsex10stv2hsugcdf (1)
	hsex10stv2hsugprobe (1)
	hsex10stv2ptense (1)
	hsex10stv2ptense7cdf (1)
	hsex10stv2ptense7probe (1)
	hsex10stv2ptensecdf (1)
	hsex10stv2ptenseprobe (1)
	hsex10stv2ptensg (1)
	hsex10stv2ptensg7cdf (1)
	hsex10stv2ptensg7probe (1)
	hsex10stv2ptensgcdf (1)
	hsex10stv2ptensgprobe (1)
	hsex10stv2ptenst (1)
	hsex10stv2ptenstcdf (1)
	hsex10stv2ptenstprobe (1)
	hsex10stv2ptentrezg (1)
	hsex10stv2ptentrezgcdf (1)
	hsex10stv2ptentrezgprobe (1)
	hsfocushsense (1)
	hsfocushsense7cdf (1)
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	hsfocushsensecdf (1)
	hsfocushsenseprobe (1)
	hsfocushsensg (1)
	hsfocushsensg7cdf (1)
	hsfocushsensg7probe (1)
	hsfocushsensgcdf (1)
	hsfocushsensgprobe (1)
	hsfocushsenst (1)
	hsfocushsenst7cdf (1)
	hsfocushsenst7probe (1)
	hsfocushsenstcdf (1)
	hsfocushsenstprobe (1)
	hsfocushsentrezg (1)
	hsfocushsentrezg7cdf (1)
	hsfocushsentrezg7probe (1)
	hsfocushsentrezgcdf (1)
	hsfocushsentrezgprobe (1)
	hsfocushsrefseq (1)
	hsfocushsrefseq7cdf (1)
	hsfocushsrefseq7probe (1)
	hsfocushsrefseqcdf (1)
	hsfocushsrefseqprobe (1)
	hsfocushsug (1)
	hsfocushsug7cdf (1)
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	hsfocushsvegae (1)
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	hsfocushsvegag (1)
	hsfocushsvegagcdf (1)
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	hsfocushsvegat (1)
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	hsfocusptense (1)
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	hsfocusptensg (1)
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	hsfocusptensg7probe (1)
	hsfocusptensgcdf (1)
	hsfocusptensgprobe (1)
	hsfocusptenst (1)
	hsfocusptenstcdf (1)
	hsfocusptenstprobe (1)
	hsfocusptentrezg (1)
	hsfocusptentrezgcdf (1)
	hsfocusptentrezgprobe (1)
	hsfocusptrefseq (1)
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	hsm (0)
	HSMMSingleCell (1)
	Hspec (14)
	hspeccdf (14)
	hta20probeset.db (22)
	hta20stprobeset.db (1)
	hta20sttranscriptcluster.db (1)
	hta20transcriptcluster.db (43)
	hthgu133a.db (79)
	hthgu133acdf (27)
	hthgu133afrmavecs (16)
	hthgu133aprobe (18)
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	hthgu133bcdf (15)
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	hthgu133pluspm.db (21)
	hthgu133pluspmcdf (32)
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	htmg430acdf (19)
	htmg430aprobe (16)
	htmg430b.db (14)
	htmg430bcdf (15)
	htmg430bprobe (16)
	htmg430pm.db (16)
	htmg430pmcdf (21)
	htmg430pmprobe (17)
	htmlTable (26)
	htmltools (318)
	htmlwidgets (244)
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	htratfocuscdf (17)
	htratfocusprobe (16)
	httpcode (1)
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	httptest (9)
	httptest2 (1)
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	httpuv (265)
	httr (232)
	httr2 (84)
	hu35ksuba (1)
	hu35ksuba.db (21)
	hu35ksubacdf (16)
	hu35ksubaprobe (16)
	hu35ksubb (1)
	hu35ksubb.db (21)
	hu35ksubbcdf (16)
	hu35ksubbprobe (16)
	hu35ksubc (1)
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	hu35ksubccdf (16)
	hu35ksubcprobe (17)
	hu35ksubd (1)
	hu35ksubd.db (21)
	hu35ksubdcdf (15)
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	hu6800 (1)
	hu6800.db (196)
	hu6800cdf (19)
	hu6800probe (16)
	hu6800subacdf (16)
	hu6800subbcdf (16)
	hu6800subccdf (16)
	hu6800subdcdf (16)
	huex.1.0.st.v2frmavecs (22)
	huex10stprobeset.db (21)
	huex10sttranscriptcluster.db (38)
	HuExExonProbesetLocation (20)
	HuExExonProbesetLocationHg18 (15)
	HuExExonProbesetLocationHg19 (15)
	huge (1)
	hugene.1.0.st.v1frmavecs (17)
	hugene10st.db (1)
	hugene10stprobeset.db (34)
	hugene10sttranscriptcluster.db (568)
	hugene10stv1.r3cdf (1)
	hugene10stv1cdf (99)
	hugene10stv1probe (29)
	hugene11stprobeset.db (32)
	hugene11sttranscriptcluster.db (62)
	hugene20stprobeset.db (24)
	hugene20sttranscriptcluster.db (54)
	hugene21stprobeset.db (25)
	hugene21sttranscriptcluster.db (27)
	human.db0 (75)
	human1mduov3bCrlmm (19)
	human1mv1cCrlmm (19)
	human370quadv3cCrlmm (18)
	human370v1cCrlmm (103)
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	humanCHRLOC (54)
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	humanomni1quadv1bCrlmm (19)
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	hwgcod.db (20)
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	hypred (1)

I

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	igraph (151)
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	Illumina450ProbeVariants.db (0)
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	IlluminaHumanMethylation27k.db (31)
	IlluminaHumanMethylation27kanno.ilmn12.hg19 (26)
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	IlluminaHumanMethylation450kanno.ilmn12.hg19 (1331)
	IlluminaHumanMethylation450kannotation.ilmn.v1.2 (1)
	IlluminaHumanMethylation450kmanifest (1163)
	IlluminaHumanMethylation450kprobe (22)
	IlluminaHumanMethylationEPICanno.ilm10b2.hg19 (337)
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	IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (1086)
	IlluminaHumanMethylationEPICmanifest (1073)
	IlluminaHumanMethylationEPICv2anno.20a1.hg38 (9)
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	illuminaHumanv1 (1)
	illuminaHumanv1.db (65)
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	illuminaHumanv2 (1)
	illuminaHumanv2.db (63)
	illuminaHumanv2BeadID.db (19)
	illuminaHumanv2ProbeID.db (1)

	illuminaHumanv3.db (197)
	illuminaHumanv3BeadID.db (2)
	illuminaHumanv3ProbeID.db (1)
	illuminaHumanv4.db (262)
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	illuminaio (1)
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	illuminaMousev1.db (31)
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	illuminaMousev1p1BeadID.db (1)
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	illuminaRatv1.db (29)
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J

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L

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	lumiHumanAll.db (89)
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	lumiMouseAll.db (18)
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	lumiRatAll.db (17)
	lumiRatIDMapping (16)
	lumiRatV1 (1)
	lvec (1)
	lwgeom (2)
	LymphoSeqDB (122)

M

	m03modeldevelopment (1)
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	MafDb.1Kgenomes.phase1.GRCh38 (19)
	MafDb.1Kgenomes.phase1.hs37d5 (117)
	MafDb.1Kgenomes.phase3.GRCh38 (57)
	MafDb.1Kgenomes.phase3.hs37d5 (136)
	MafDb.ALL.wgs.phase1.release.v3.20101123 (3)
	MafDb.ALL.wgs.phase3.release.v5a.20130502 (1)
	MafDb.ALL.wgs.phase3.release.v5b.20130502 (1)
	MafDb.ESP6500SI.V2.SSA137 (2)
	MafDb.ESP6500SI.V2.SSA137.dbSNP138 (2)
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	mm74av1mmenseprobe (1)
	mm74av1mmensg (1)
	mm74av1mmensg7cdf (1)
	mm74av1mmensg7probe (1)
	mm74av1mmensgcdf (1)
	mm74av1mmensgprobe (1)
	mm74av1mmenst (1)

	mm74av1mmenst7cdf (1)
	mm74av1mmenst7probe (1)
	mm74av1mmenstcdf (1)
	mm74av1mmenstprobe (1)
	mm74av1mmentrezg (1)
	mm74av1mmentrezg7cdf (1)
	mm74av1mmentrezg7probe (1)
	mm74av1mmentrezgcdf (1)
	mm74av1mmentrezgprobe (1)
	mm74av1mmrefseq (1)
	mm74av1mmrefseq7cdf (1)
	mm74av1mmrefseq7probe (1)
	mm74av1mmrefseqcdf (1)
	mm74av1mmrefseqprobe (1)
	mm74av1mmug (1)
	mm74av1mmug7cdf (1)
	mm74av1mmug7probe (1)
	mm74av1mmugcdf (1)
	mm74av1mmugprobe (1)
	mm74av1mmvegae (1)
	mm74av1mmvegaecdf (1)
	mm74av1mmvegaeprobe (1)
	mm74av1mmvegag (1)
	mm74av1mmvegagcdf (1)
	mm74av1mmvegagprobe (1)
	mm74av1mmvegat (1)
	mm74av1mmvegatcdf (1)
	mm74av1mmvegatprobe (1)
	mm74av2mmense (1)
	mm74av2mmense7cdf (1)
	mm74av2mmense7probe (1)
	mm74av2mmensecdf (1)
	mm74av2mmenseprobe (1)
	mm74av2mmensg (1)
	mm74av2mmensg7cdf (1)
	mm74av2mmensg7probe (1)
	mm74av2mmensgcdf (1)
	mm74av2mmensgprobe (1)
	mm74av2mmenst (1)
	mm74av2mmenst7cdf (1)
	mm74av2mmenst7probe (1)
	mm74av2mmenstcdf (1)
	mm74av2mmenstprobe (1)
	mm74av2mmentrezg (1)
	mm74av2mmentrezg7cdf (1)
	mm74av2mmentrezg7probe (1)
	mm74av2mmentrezgcdf (1)
	mm74av2mmentrezgprobe (1)
	mm74av2mmrefseq (1)
	mm74av2mmrefseq7cdf (1)
	mm74av2mmrefseq7probe (1)
	mm74av2mmrefseqcdf (1)
	mm74av2mmrefseqprobe (1)
	mm74av2mmug (1)
	mm74av2mmug7cdf (1)
	mm74av2mmug7probe (1)
	mm74av2mmugcdf (1)
	mm74av2mmugprobe (1)
	mm74av2mmvegae (1)
	mm74av2mmvegaecdf (1)
	mm74av2mmvegaeprobe (1)
	mm74av2mmvegag (1)
	mm74av2mmvegagcdf (1)
	mm74av2mmvegagprobe (1)
	mm74av2mmvegat (1)
	mm74av2mmvegatcdf (1)
	mm74av2mmvegatprobe (1)
	mm74bv2mmense (1)
	mm74bv2mmensecdf (1)
	mm74bv2mmenseprobe (1)
	mm74bv2mmensg (1)
	mm74bv2mmensgcdf (1)
	mm74bv2mmensgprobe (1)
	mm74bv2mmenst (1)
	mm74bv2mmenstcdf (1)
	mm74bv2mmenstprobe (1)
	mm74bv2mmentrezg (1)
	mm74bv2mmentrezgcdf (1)
	mm74bv2mmentrezgprobe (1)
	mm74bv2mmrefseq (1)
	mm74bv2mmrefseqcdf (1)
	mm74bv2mmrefseqprobe (1)
	mm74bv2mmug (1)
	mm74bv2mmugcdf (1)
	mm74bv2mmugprobe (1)
	mm74bv2mmvegae (1)
	mm74bv2mmvegaecdf (1)
	mm74bv2mmvegaeprobe (1)
	mm74bv2mmvegag (1)
	mm74bv2mmvegagcdf (1)
	mm74bv2mmvegagprobe (1)
	mm74bv2mmvegat (1)
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	mm74bv2mmvegatprobe (1)
	mm74cv2mmense (1)
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	mm74cv2mmensgprobe (1)
	mm74cv2mmenst (1)
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	mm74cv2mmenstprobe (1)
	mm74cv2mmentrezg (1)
	mm74cv2mmentrezgcdf (1)
	mm74cv2mmentrezgprobe (1)
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	mm74cv2mmug (1)
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	mma (1)
	MmAgilentDesign026655.db (23)
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	mmex10stv1mmensecdf (1)
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	mmex10stv1mmensg (1)
	mmex10stv1mmensg7cdf (1)
	mmex10stv1mmensg7probe (1)
	mmex10stv1mmensgcdf (1)
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	mmex10stv1mmenst (1)
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	mmex10stv1mmenst7probe (1)
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	mmex10stv1mmenstprobe (1)
	mmex10stv1mmentrezg (1)
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	mmex10stv1mmentrezg7probe (1)
	mmex10stv1mmentrezgcdf (1)
	mmex10stv1mmentrezgprobe (1)
	mmex10stv1mmrefseq (1)
	mmex10stv1mmrefseq7cdf (1)
	mmex10stv1mmrefseq7probe (1)
	mmex10stv1mmrefseqcdf (1)
	mmex10stv1mmrefseqprobe (1)
	mmex10stv1mmug (1)
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N

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	numbers (1)
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	nycflights13 (1)

O

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	org.Mm.cross.db (1)
	org.Mm.eg.db (7686)
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	TxDb.Dmelanogaster.UCSC.dm3.ensGene (535)
	TxDb.Dmelanogaster.UCSC.dm6.ensGene (320)
	txdb.dmelanogaster.ucsc.dm6.ensgene (0)
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	TxDb.Ggallus.UCSC.galGal4.refGene (17)
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	TxDb.Hsapiens.BioMart.igis (17)
	TxDb.Hsapiens.UCSC.hg18.knownGene (482)
	TxDb.Hsapiens.UCSC.hg19.knownGene (4794)
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	TxDb.Mmusculus.UCSC.mm10.ensGene (118)
	TxDb.Mmusculus.UCSC.mm10.knownGene (1416)
	TxDb.Mmusculus.UCSC.mm39.knownGene (79)
	TxDb.Mmusculus.UCSC.mm39.refGene (123)
	TxDb.Mmusculus.UCSC.mm9.knownGene (613)
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	TxDb.Rnorvegicus.UCSC.rn4.ensGene (282)
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	TxDb.Rnorvegicus.UCSC.rn6.refGene (139)
	TxDb.Rnorvegicus.UCSC.rn7.refGene (110)
	TxDb.Scerevisiae.UCSC.sacCer2.ensGene (1)
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	TxDb.Scerevisiae.UCSC.sacCer3.sgdGene (90)
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