logicFS
Identification of SNP Interactions
Bioconductor version: Release (3.19)
Identification of interactions between binary variables using Logic Regression. Can, e.g., be used to find interesting SNP interactions. Contains also a bagging version of logic regression for classification.
Author: Holger Schwender, Tobias Tietz
Maintainer: Holger Schwender <holger.schw at gmx.de>
Citation (from within R, enter
citation("logicFS")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("logicFS")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("logicFS")
logicFS Manual | R Script | |
Reference Manual |
Details
biocViews | Classification, Genetics, SNP, Software |
Version | 2.24.0 |
In Bioconductor since | BioC 1.8 (R-2.3) (18.5 years) |
License | LGPL (>= 2) |
Depends | LogicReg, mcbiopi, survival |
Imports | graphics, methods, stats |
System Requirements | |
URL |
See More
Suggests | genefilter, siggenes |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | trio |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | logicFS_2.24.0.tar.gz |
Windows Binary | logicFS_2.24.0.zip (64-bit only) |
macOS Binary (x86_64) | logicFS_2.24.0.tgz |
macOS Binary (arm64) | logicFS_2.24.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/logicFS |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/logicFS |
Bioc Package Browser | https://code.bioconductor.org/browse/logicFS/ |
Package Short Url | https://bioconductor.org/packages/logicFS/ |
Package Downloads Report | Download Stats |