* checking for file 'EBImage/DESCRIPTION' ... OK
* preparing 'EBImage':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'EBImage' ...
checking for Magick++-config... yes
ImageMagick version 6.2.8 found
checking for Magick++-config... yes
ImageMagick++ includes located in -I/usr/local/include
R found in: /loc/biocbuild/1.9d/R
configure: creating ./config.status
config.status: creating src/Makevars
** libs
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c alg_watershed.cpp -o alg_watershed.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c colors.cpp -o colors.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c common.cpp -o common.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c conversions.cpp -o conversions.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c display.cpp -o display.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c drawables.cpp -o drawables.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c flt_distmap.cpp -o flt_distmap.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c flt_magick.cpp -o flt_magick.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c flt_morph.cpp -o flt_morph.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c flt_normalize.cpp -o flt_normalize.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c flt_thresh.cpp -o flt_thresh.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c indexing.cpp -o indexing.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c io.cpp -o io.o
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -I/usr/local/include -D_REENTRANT -pthreads -fPIC -g -O2 -Wall -c libmain.cpp -o libmain.o
g++ -G -L/usr/local/lib -o EBImage.so alg_watershed.o colors.o common.o conversions.o display.o drawables.o flt_distmap.o flt_magick.o flt_morph.o flt_normalize.o flt_thresh.o indexing.o io.o libmain.o -L/usr/local/lib -L/usr/openwin/lib -R/usr/openwin/lib -L/usr/local/lib -R/usr/local/lib -lfreetype -lz -L/usr/local/lib -lMagick++ -lMagick -lfreetype -ljpeg -lXext -lSM -lICE -lX11 -lsocket -lnsl -lXt -lbz2 -lz -lpthread -lm -lpthread -lWand -lMagick
** R
** inst
** save image
** help
>>> Building/Updating help pages for package 'EBImage'
Formats: text html latex example
Drawable.class text html latex example
Drawable.draw text html latex example
EBImage-package text html latex
Image.class text html latex example
Image.io text html latex example
alg.watershed text html latex example
colors text html latex example
colors.arithm text html latex
flt.distMap text html latex example
flt.magick-colors text html latex example
flt.magick-enhance text html latex example
flt.magick-segment text html latex example
flt.magick-transform text html latex example
flt.magick text html latex
flt.morph text html latex example
flt.morph.mKernel text html latex example
flt.thresh text html latex example
internals text html latex
updates text html latex
** building package indices ...
* DONE (EBImage)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'EBImage_1.6.0.tar.gz'