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| Package 121/208 | OS | Arch | BUILD | CHECK | BUILD BIN |
metaArray1.7.1Hyungwon Choi | Linux (SUSE 9.2) | x86_64 | OK | OK | |
| Linux (SUSE 10.1) | x86_64 | OK | OK | ||
| Linux (SUSE 9.2) | i686 | OK | OK | ||
| Solaris 2.9 | sparc | OK | OK | ||
| Windows Server 2003 | x86_64 | OK | OK | OK | |
| Windows Server 2003 | NA | ERROR | skipped | skipped | |
| Mac OS X (10.4.6) | i686 | OK | [ OK ] |
| Package: metaArray |
| Version: 1.7.1 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check metaArray_1.7.1.tar.gz |
| RetCode: 0 |
| Time: 55.6 seconds |
| Status: OK |
| CheckDir: metaArray.Rcheck |
| Warnings: 0 |
* checking for working latex ... OK * using log directory '/Users/biocbuild/2.0d/Rpacks/metaArray.Rcheck' * using R version 2.5.0 Under development (unstable) (2006-10-21 r39702) * checking for file 'metaArray/DESCRIPTION' ... OK * this is package 'metaArray' version '1.7.1' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'metaArray' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for non-ASCII characters ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating metaArray-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating metaArray-manual.tex ... OK * checking metaArray-manual.tex ... OK
metaArray.Rcheck/00install.out:
* Installing *source* package 'metaArray' ...
** libs
** arch - i386
gcc-4.0 -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -DUSEDOUBLE -fPIC -g -O2 -std=gnu99 -march=pentium-m -mtune=prescott -c contr.c -o contr.o
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gcc-4.0 -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -DUSEDOUBLE -fPIC -g -O2 -std=gnu99 -march=pentium-m -mtune=prescott -c dproc.c -o dproc.o
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gcc-4.0 -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -DUSEDOUBLE -fPIC -g -O2 -std=gnu99 -march=pentium-m -mtune=prescott -c dproc2.c -o dproc2.o
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gcc-4.0 -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -DUSEDOUBLE -fPIC -g -O2 -std=gnu99 -march=pentium-m -mtune=prescott -c intcor.c -o intcor.o
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gcc-4.0 -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -DUSEDOUBLE -fPIC -g -O2 -std=gnu99 -march=pentium-m -mtune=prescott -c lowess.c -o lowess.o
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gcc-4.0 -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -DUSEDOUBLE -fPIC -g -O2 -std=gnu99 -march=pentium-m -mtune=prescott -c mmath.c -o mmath.o
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gcc-4.0 -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -DUSEDOUBLE -fPIC -g -O2 -std=gnu99 -march=pentium-m -mtune=prescott -c perm.c -o perm.o
/var/tmp//cc8WaOvg.s:109:indirect jmp without `*'
gcc-4.0 -arch i386 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -D__NO_MATH_INLINES -DUSEDOUBLE -fPIC -g -O2 -std=gnu99 -march=pentium-m -mtune=prescott -c poe.c -o poe.o
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gcc-4.0 -arch i386 -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o metaArray.so contr.o dproc.o dproc2.o intcor.o lowess.o mmath.o perm.o poe.o -lm -F/Library/Frameworks/R.framework/.. -framework R
** arch - ppc
gcc-4.0 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DUSEDOUBLE -fPIC -g -O2 -c contr.c -o contr.o
gcc-4.0 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DUSEDOUBLE -fPIC -g -O2 -c dproc.c -o dproc.o
gcc-4.0 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DUSEDOUBLE -fPIC -g -O2 -c dproc2.c -o dproc2.o
gcc-4.0 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DUSEDOUBLE -fPIC -g -O2 -c intcor.c -o intcor.o
gcc-4.0 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DUSEDOUBLE -fPIC -g -O2 -c lowess.c -o lowess.o
gcc-4.0 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DUSEDOUBLE -fPIC -g -O2 -c mmath.c -o mmath.o
gcc-4.0 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DUSEDOUBLE -fPIC -g -O2 -c perm.c -o perm.o
gcc-4.0 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc -I/usr/local/include -DUSEDOUBLE -fPIC -g -O2 -c poe.c -o poe.o
gcc-4.0 -arch ppc -std=gnu99 -dynamiclib -Wl,-macosx_version_min -Wl,10.3 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o metaArray.so contr.o dproc.o dproc2.o intcor.o lowess.o mmath.o perm.o poe.o -lm -F/Library/Frameworks/R.framework/.. -framework R
** R
** data
** inst
** help
>>> Building/Updating help pages for package 'metaArray'
Formats: text html latex example
Zscore text html latex example
em.draw text html latex example
find.init text html latex example
fit.em text html latex example
intcor text html latex example
logit text html latex
mdata text html latex
poe.em text html latex example
poe.mcmc text html latex example
** building package indices ...
* DONE (metaArray)