Package: siggenes

Version: 1.9.4

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build siggenes

RetCode: 0

Time: 29.3 seconds

Status: OK

PackageFile: siggenes_1.9.4.tar.gz

* checking for file 'siggenes/DESCRIPTION' ... OK
* preparing 'siggenes':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'siggenes' ...
** R
** inst
** preparing package for lazy loading
Loading required package: multtest
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: survival
Loading required package: splines
Creating a new generic function for "print" in "siggenes"
Creating a new generic function for "identify" in "siggenes"
** help
Warning: \alias{cat.stat} already in sam.snp.Rd -- skipping the one in siggenes-internal.Rd
 >>> Building/Updating help pages for package 'siggenes'
     Formats: text html latex example 
  SAM-class                         text    html    latex   example
  delta.plot                        text    html    latex   example
  ebam                              text    html    latex   example
  ebam.wilc                         text    html    latex   example
  find.a0                           text    html    latex   example
  fudge2                            text    html    latex
  help.sam                          text    html    latex   example
  link.genes                        text    html    latex
  link.siggenes                     text    html    latex
  list.siggenes                     text    html    latex   example
  na.handling                       text    html    latex   example
  na.replace.cont                   text    html    latex
  na.replace.dist                   text    html    latex
  pi0.est                           text    html    latex   example
  qvalue.cal                        text    html    latex   example
  sam                               text    html    latex   example
  sam.dstat                         text    html    latex   example
  sam.plot2                         text    html    latex   example
  sam.snp                           text    html    latex
  sam.wilc                          text    html    latex   example
  sam2excel                         text    html    latex
  sam2html                          text    html    latex
  siggenes-internal                 text    html    latex
  sumSAM-class                      text    html    latex
** building package indices ...
* DONE (siggenes)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'siggenes_1.9.4.tar.gz'