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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 67/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
ecolitk1.9.0LaurentLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | ERROR | skipped | |
wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | [ ERROR ] | skipped | skipped | |
pitt | Mac OS X (10.4.10) | i386 | ERROR | skipped | skipped |
Package: ecolitk |
Version: 1.9.0 |
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build ecolitk |
RetCode: 1 |
Time: 40.6 seconds |
Status: ERROR |
PackageFile: None |
* checking for file 'ecolitk/DESCRIPTION' ... OK * preparing 'ecolitk': * checking DESCRIPTION meta-information ... OK * checking whether 'INDEX' is up-to-date ... NO * use '--force' to overwrite the existing 'INDEX' * installing the package to re-build vignettes installing R.css in E:/biocbld/bbs-2.1-bioc/tmpdir/Rinst463603930 ---------- Making package ecolitk ------------ adding build stamp to DESCRIPTION installing R files installing inst files installing data files installing man source files installing indices not zipping data installing help Note: unmatched right brace in 'linkedmultiget' on or after line 6 Note: unmatched right brace in 'linkedmultiget.Rd' on or after line 6 Note: unmatched right brace in 'wstringapply' on or after line 6 Note: unmatched right brace in 'wstringapply.Rd' on or after line 6 >>> Building/Updating help pages for package 'ecolitk' Formats: text html latex example chm ecoli.data text html latex example chm ecoligenome.operon text html latex example chm ecoligenomeBNUM text html latex chm ecoligenomeBNUM2MULTIFUN text html latex chm gccontent text html latex chm linkedmultiget text html latex example chm multiFun text html latex example chm pointsCircle text html latex example chm polar2xy text html latex example chm polygonChrom text html latex example chm wstringapply text html latex example chm Microsoft HTML Help Compiler 4.74.8702 Compiling e:\biocbld\bbs-2.1-bioc\meat\ecolitk\chm\ecolitk.chm Compile time: 0 minutes, 0 seconds 12 Topics 45 Local links 4 Internet links 1 Graphic Created e:\biocbld\bbs-2.1-bioc\meat\ecolitk\chm\ecolitk.chm, 29,492 bytes Compression decreased file by 13,451 bytes. adding MD5 sums * DONE (ecolitk) * creating vignettes ... ERROR Loading required package: affy Loading required package: Biobase Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: affyio Loading required package: preprocessCore Loading required package: ecoliLeucine Loading required package: ecolicdf Error: processing vignette 'ecolitk.Rnw' failed with diagnostics: chunk 16 Error in err(isConflict[!isNull]) : assayData element dimnames conflict: se.exprs, exprs In addition: Warning messages: 1: '\.' is an unrecognized escape in a character string 2: unrecognized escape removed from "^1\\\.6" Execution halted