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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1
Package 101/247HostnameOSArchBUILDCHECKBUILD BIN

goTools

1.9.0

Agnes Paquet
Last Changed Date: 2007-05-11 21:56:41 -0700
Last Changed Rev: 24616
lamb1 Linux (SUSE 10.1) x86_64  ERROR skipped
wellington Linux (SUSE 9.2) i686 [ ERROR ]skipped
liverpool Windows Server 2003 R2 (32-bit) x64  ERROR skippedskipped
pitt Mac OS X (10.4.10) i386  ERROR skippedskipped
Package: goTools
Version: 1.9.0
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build goTools
RetCode: 1
Time: 52.8 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'goTools/DESCRIPTION' ... OK
* preparing 'goTools':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... OK
* installing the package to re-build vignettes
* Installing *source* package 'goTools' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: GO
** help
 >>> Building/Updating help pages for package 'goTools'
     Formats: text html latex example 
  EndNodeList                       text    html    latex   example
  goTools-internal                  text    html    latex
  ontoCompare                       text    html    latex   example
  probeID                           text    html    latex
** building package indices ...
* DONE (goTools)
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: GO

Attaching package: 'goTools'


	The following object(s) are masked from package:annotate :

	 getGOTerm 


Error: processing vignette 'goTools.Rnw' failed with diagnostics:
 chunk 5 
Error in file(file, "r") : unable to open connection
In addition: Warning message:
In file(file, "r") : cannot open: HTTP status was '404 Not Found'
Execution halted