Package: GEOquery

Version: 2.11.3

Command: E:\biocbld\bbs-2.5-bioc\R\bin\R.exe CMD check --no-vignettes GEOquery_2.11.3.tar.gz

StartedAt: 2010-04-03 04:58:16 -0700 (Sat, 03 Apr 2010)

EndedAt: 2010-04-03 04:59:20 -0700 (Sat, 03 Apr 2010)

EllapsedTime: 63.3 seconds

RetCode: 0

Status: OK

CheckDir: GEOquery.Rcheck

Warnings: 0

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.5-bioc/meat/GEOquery.Rcheck'
* using R version 2.10.1 (2009-12-14)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'GEOquery/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'GEOquery' version '2.11.3'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'GEOquery' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: dataTable.Rd:13-14: Dropping empty section \usage
prepare_Rd: dataTable.Rd:15-16: Dropping empty section \arguments
prepare_Rd: dataTable.Rd:17-18: Dropping empty section \details
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

* install options are ' --no-html'

* installing *source* package 'GEOquery' ...
** R
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: bitops
** help
*** installing help indices
** building package indices ...
** MD5 sums
* DONE (GEOquery)