Package: ontoTools

Version: 1.24.0

Command: E:\biocbld\bbs-2.5-bioc\R\bin\R.exe CMD build ontoTools

StartedAt: 2010-04-03 01:30:13 -0700 (Sat, 03 Apr 2010)

EndedAt: 2010-04-03 01:32:43 -0700 (Sat, 03 Apr 2010)

EllapsedTime: 149.9 seconds

RetCode: 0

Status: OK

PackageFile: ontoTools_1.24.0.tar.gz

PackageFileSize: 3.308 MiB

* checking for file 'ontoTools/DESCRIPTION' ... OK
* preparing 'ontoTools':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* installing *source* package 'ontoTools' ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Package SparseM (0.85) loaded.
	   To cite, see citation("SparseM")


Attaching package: 'SparseM'


	The following object(s) are masked from package:base :

	 backsolve 

Loading required package: DBI
Creating a generic for "colSums" in package "ontoTools"
    (the supplied definition differs from and overrides the implicit generic
    in package "base": Formal arguments differ: (x, na.rm, dims), (x, na.rm, dims, ...))
Creating a generic for "rowSums" in package "ontoTools"
    (the supplied definition differs from and overrides the implicit generic
    in package "base": Formal arguments differ: (x, na.rm, dims), (x, na.rm, dims, ...))
Creating a new generic function for "grep" in "ontoTools"
In method for function "grep": expanding the signature to include
omitted arguments in definition: invert = "missing"
** help
*** installing help indices
** building package indices ...
** MD5 sums
* DONE (ontoTools)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'ontoTools_1.24.0.tar.gz'