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Package 178/462HostnameOS / ArchBUILDCHECKBUILD BIN
GeneRegionScan 1.9.0
Lasse Folkersen
Snapshot Date: 2011-05-09 07:20:56 -0700 (Mon, 09 May 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GeneRegionScan
Last Changed Rev: 54802 / Revision: 55359
Last Changed Date: 2011-04-13 15:36:43 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ ERROR ] skipped  skipped 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  ERROR  skipped  skipped 

Summary

Package: GeneRegionScan
Version: 1.9.0
Command: chmod a+r GeneRegionScan -R && E:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data GeneRegionScan
StartedAt: 2011-05-09 10:58:28 -0700 (Mon, 09 May 2011)
EndedAt: 2011-05-09 10:58:52 -0700 (Mon, 09 May 2011)
EllapsedTime: 24.0 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'GeneRegionScan/DESCRIPTION' ... OK
* preparing 'GeneRegionScan':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: Biostrings
Loading required package: IRanges

Attaching package: 'IRanges'

The following object(s) are masked from 'package:Biobase':

    updateObject

The following object(s) are masked from 'package:base':

    Map, cbind, eval, intersect, mapply, order, paste, pmax, pmax.int,
    pmin, pmin.int, rbind, rep.int, setdiff, table, union


Error: processing vignette 'GeneRegionScan.Rnw' failed with diagnostics:
 chunk 8 (label = plot3) 
Error in plot.xy(xy.coords(x, y), type = type, ...) : 
  plot.new has not been called yet
Execution halted