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This page was generated on 2021-10-15 15:06:38 -0400 (Fri, 15 Oct 2021).

BUILD results for HCAMatrixBrowser on machv2

To the developers/maintainers of the HCAMatrixBrowser package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HCAMatrixBrowser.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 844/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HCAMatrixBrowser 1.2.0  (landing page)
Marcel Ramos
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/HCAMatrixBrowser
git_branch: RELEASE_3_13
git_last_commit: 708a166
git_last_commit_date: 2021-05-19 12:53:14 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: HCAMatrixBrowser
Version: 1.2.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data HCAMatrixBrowser
StartedAt: 2021-10-14 12:33:59 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 12:34:50 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 50.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data HCAMatrixBrowser
###
##############################################################################
##############################################################################


* checking for file ‘HCAMatrixBrowser/DESCRIPTION’ ... OK
* preparing ‘HCAMatrixBrowser’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘HCAMatrix.Rmd’ using rmarkdown
Loading required package: AnVIL
Loading required package: dplyr

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Warning: Package 'HCAMatrixBrowser' is deprecated and will be removed from
  Bioconductor version 3.14

Attaching package: 'HCAMatrixBrowser'

The following object is masked from 'package:dplyr':

    filter

The following object is masked from 'package:stats':

    filter

Quitting from lines 58-59 (HCAMatrix.Rmd) 
Error: processing vignette 'HCAMatrix.Rmd' failed with diagnostics:
Could not resolve host: matrix.data.humancellatlas.org
--- failed re-building ‘HCAMatrix.Rmd’

--- re-building ‘HCAMatrixBrowser.Rmd’ using rmarkdown
Warning: Package 'HCABrowser' is deprecated and will be removed from
  Bioconductor version 3.14
Quitting from lines 102-103 (HCAMatrixBrowser.Rmd) 
Error: processing vignette 'HCAMatrixBrowser.Rmd' failed with diagnostics:
Could not resolve host: matrix.data.humancellatlas.org
--- failed re-building ‘HCAMatrixBrowser.Rmd’

SUMMARY: processing the following files failed:
  ‘HCAMatrix.Rmd’ ‘HCAMatrixBrowser.Rmd’

Error: Vignette re-building failed.
Execution halted