| Back to Build/check report for BioC 3.13 experimental data |
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This page was generated on 2021-10-16 15:58:41 -0400 (Sat, 16 Oct 2021).
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To the developers/maintainers of the HiCDataLymphoblast package: Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 179/406 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
| HiCDataLymphoblast 1.28.0 (landing page) Borbala Mifsud
| malbec2 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | ||||||||
| Package: HiCDataLymphoblast |
| Version: 1.28.0 |
| Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD check --install=check:HiCDataLymphoblast.install-out.txt --library=/home/biocbuild/bbs-3.13-bioc/R/library --no-vignettes --timings HiCDataLymphoblast_1.28.0.tar.gz |
| StartedAt: 2021-10-16 13:22:01 -0400 (Sat, 16 Oct 2021) |
| EndedAt: 2021-10-16 13:22:11 -0400 (Sat, 16 Oct 2021) |
| EllapsedTime: 9.9 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: HiCDataLymphoblast.Rcheck |
| Warnings: 0 |
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### Running command:
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### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD check --install=check:HiCDataLymphoblast.install-out.txt --library=/home/biocbuild/bbs-3.13-bioc/R/library --no-vignettes --timings HiCDataLymphoblast_1.28.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.13-data-experiment/meat/HiCDataLymphoblast.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘HiCDataLymphoblast/DESCRIPTION’ ... OK
* this is package ‘HiCDataLymphoblast’ version ‘1.28.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
.git_fetch_output.txt
.git_merge_output.txt
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘HiCDataLymphoblast’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 58.2Mb
sub-directories of 1Mb or more:
extdata 58.1Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.13-data-experiment/meat/HiCDataLymphoblast.Rcheck/00check.log’
for details.
HiCDataLymphoblast.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL HiCDataLymphoblast ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’ * installing *source* package ‘HiCDataLymphoblast’ ... ** using staged installation ** inst ** help No man pages found in package ‘HiCDataLymphoblast’ *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HiCDataLymphoblast)